G1424225


Basic Information

Item Value
gene id G1424225
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 16852521 ~ 16854548 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1630501
CTGGACCTAACAGCCCAGCTGTGCCCAAACTAACACACCACCTCTACCGAACTGGTCTGgtgtagtgtgggatgataacaccacctctatctaactggtctagtgtagtgtgggatgataacaccacctctatctaactggtctggtgtagtgtgggatgataacaccacttctatctaactggtctagtgtagtgtgggatgataacaccacttctacctaactggtctagtgtgggatgataacaccacctctacctaactggtctagtgtagtgtgggatgataacaccacttctacctaactggtctagtgtgggatgataacaccacctctacctaACTGGCCTAGTGTAGtgggggatgataacaccacctctatctaactggtctagtgtagtgggggatgataacaccacctctacctaactggtctagtgtgggatgataacaccacctctacctaactggtctagtgtagtgtgggatgataacaccacttctacctaactggtctagtgtgggatgataacaccacctcaacctaactggtctagtgggAGATGATAtcaccacctctatctaactggtctagtgggggatgataacaccacctctatctaactggtctagtgggggatgataacaccacctctatctaactggtctagtgtgggatgataacaccacctctatctaactggtctagtgtagtgtgggatgataacaccacctctacctaactggtctagtgtagtAGGGGATGATGACACCAGCTCTATATAACTAGTCTAgtgtagtgtgggatgataacaccacctctacctaactggcctagtgtagtgtgggatgataacaccacctctatctaactggtctagtgtagtgggggatgataacaccacctctatctaactggtgTAGTGGAGtttgggatgataacaccacctctacctaactggtctagtgtgggatgataacaccacctctatctaactggtctagtgtagtgggggatgataacaccacctctatctaactggtctagtgggggatgataacaccacctctatctaactggtctagtgtagtgggggatgataacaccacctctatctaactggtctagtgggggatgataacaccacctctatctaactggtctgGTGTAGTggggggatgataacaccacctctatctaactggtctagtgtagtgtgggatgataacaccacctctatctaactgtTCTAGTGTAGTGTTGGATGATAACACCACCactatctaactggtctagtggggatgataacaccacctctatctaactgatCTAGTGgagtgtgggatgataacaccacctctatctaactggtctagtgtgggatgataacaccacctctatctaactgatCTAGTGgagtgtgggatgataacaccacctctatctaactggtctagtgtgggatgataacaccacctctacctaactggtctagtgtagtgtgtgtggtggggtgttTAGCCACTAGTGCAGAAGGAAAGTGTGACTCTCTATATATTAATGATATTTTCACTCCATTCTTGTTGAATCATTACATAGAATGATTAATGCAACTTGATCTGGGACTTCCAGGTGGGGGTGTTGTGTGTTTAGTCCCCGTCGTGATACACTTGGGTTAGCTCAGCTCTCAGGCTCCTTGTCTGGGGCTGGTTCTTGCACATCTggtttcaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtctgtgcgaGCGTGTACATGTGTGTGAATGAGTCATTGCCAGATAAGGTGTCGGTCTGGACTATGTTACTTCATAGGAATTTTATTATACCCTGTATCGTCATGTTGAAGGTTGTCCTCAGAAATCCAGAAATTCAAATCCCTGGGTTTTCTGAGATAGCATTCTGCCGGAGTCTGCCCatgtcaacagtagtgcactgtttAGGTCAgggggtgctatttgggatacacATCTAGTCAGGTGGGAGTCAGAtgaaggagag
>TU1630502
gtgtgtgtgtttgtgtctgtgcgaGCGTGTACATGTGTGTGAATGAGTCATTGCCAGATAAGGTGTCGGTCTGGACTATGTTACTTCATAGGAATTTTATTATACCCTGTATCGTCATGTTGAAGGTTGTCCTCAGAAATCCAGAAATTCAAATCCCTGGGTTTTCTGAGATAGCATTCTGCCGGAGTCTGCCCatgtcaacagtagtgcactgtttAGGTCAgggggtgctatttgggatacacATCTAGTCAGGTGGGAGTCAGAtgaaggagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1630501 False 2028 lncRNA 0.46 1 16852521 16854548
TU1630502 True 277 lncRNA 0.45 1 16852521 16852797

Neighbor

gene id symbol gene type direction distance location
LOC110494924 LOC106592628 coding downstream 15806 16819145 ~ 16836715 (-)
LOC110494933 LOC106591120 coding downstream 110989 16736497 ~ 16741532 (-)
LOC110494948 LOC106564393 coding downstream 121132 16717096 ~ 16731389 (-)
LOC110494903 LOC106564394 coding downstream 140627 16706615 ~ 16711894 (-)
LOC110495074 LOC106564395 coding downstream 150693 16697311 ~ 16701828 (-)
LOC110495067 LOC106590617 coding upstream 5842 16860390 ~ 16933566 (-)
LOC110494935 LOC106590780 coding upstream 84755 16939303 ~ 16968595 (-)
LOC110493425 LOC106594459 coding upstream 126185 16980733 ~ 16987774 (-)
LOC110495066 rayl coding upstream 234476 17089024 ~ 17108667 (-)
LOC110495065 LOC106564434 coding upstream 287515 17142063 ~ 17146929 (-)
G1424223 NA non-coding downstream 1988 16845932 ~ 16850533 (-)
G1424226 NA non-coding downstream 7005 16844061 ~ 16845516 (-)
G1424224 NA non-coding downstream 8756 16843226 ~ 16843765 (-)
G1424249 NA non-coding downstream 45979 16806172 ~ 16806542 (-)
G1424274 NA non-coding upstream 46423 16900971 ~ 16901204 (-)
G1424306 NA non-coding upstream 141527 16996075 ~ 16996275 (-)
G1424309 NA non-coding upstream 143956 16998504 ~ 17063510 (-)
G1424337 NA non-coding upstream 227473 17082021 ~ 17084360 (-)
G1424227 NA other downstream 1035 16850751 ~ 16851486 (-)
G1424234 NA other downstream 79564 16770437 ~ 16772957 (-)
LOC110508387 LOC106599573 other downstream 193991 16564951 ~ 16674565 (-)
G1424038 LOC106591467 other downstream 437662 16412058 ~ 16418005 (-)
G1424051 cbx6 other downstream 442393 16406731 ~ 16410128 (-)
G1424218 NA other upstream 929 16855477 ~ 16938699 (-)
G1424547 NA other upstream 602381 17456929 ~ 17457504 (-)
G1425321 NA other upstream 1054517 17909065 ~ 17911376 (-)
G1425419 NA other upstream 1465383 18319931 ~ 18326899 (-)

Expression


Co-expression Network