G1424353 (cuta)


Basic Information

Item Value
gene id G1424353
gene name cuta
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 17133884 ~ 17137231 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1630663
tatttattttttatacagcTTTTTTTCtcgtctttatcaagggtgccaatcattttggacctAACTGTAGATAGACCCTTTCACTGCATCCCTCTATTGGTCAAAACCAGAACAACACTgaaacagtaaaaatacattttagtcaCATTTCTGCAGATTTTATTATTCCAAATACATTTCTCGCagcctccctctgtccatccacctatcccttcctctctccatccacccatcATTCTGGTACAGCGTCACCAAGCCACTTGAGGTAGGGTGGGTTGCCCTGCTCTATGGGTAGGCTGATGACCTCTGCTACTTCATACGGGTGGTTGGACctAACATATTCTGCCAGAGATGCAACCTTAGAACTTCTGGTCTTTATCATCAGCAACACTTCACTATCCTCCTGGACCTTCCCCTGCCACTCATATACAGATGTGATTTGGGGGACGATGTTGACACAAGCAGCCAGCTTCTTCTCAACGATTCCTCTGGCCAGATCTTTAGCCACCTGTTCGTTGGGGCAGGTGACGAAGGCAGCGGAGTGTGTGCCCGACAAGTAGGTCTCGGACGCCATGGAGAATGCTCTCAATCCCACAGTCCTCAGCAGCGTGAGCATCAACACGCTAAGCAACGCAATCTAGGGGTCGCCATGTAAACAGAGGTTAGGAGAAGAATTGACAGACAACATTCTATGGTGGAAATATTTCACGAGAAatacattaaatcaaatcacCCACTTCACTGTTTCTGCATATTACAATGGCTAGGACTAGGCTACATTTTGCTACACTGTACGTTACATTTGGCAAGACAACAAGCATATACGACGAACTGGATTGCAGACGGCTAAGCATCTTCTTGAATATGTCTATTCTACTTGACTACAGCTCGACTACTTGTGGTTTGGGACACATACTCACCACAAAGAATGCCCTCAGAGGTCCACCAGCCTGCAATCCTTCTGTAGCAGGCAGTCCAAAGCGCATTGCCTATGCAGCACTCTGCAGCAGGGGCAAGTGACATACATGCATTAGCAATCATACATGGCAGCCCGGGAGAGATGACGTTCAATGAGTTCATAGCATGACAAGTTCGGCCATAGGCAAACGTCCAAATAGTGAAAAGTACAATTCTGCTTATGGACTAGCACTAGATAAAAACAGCATACAATACGAAGCTAGCGGCTAATTGGGTGTGACTTTACTGTGGGTTTGCTCAACTCGCTGTAACTTGGCACGTACAAATGCAGGACAGGACTTTTGCAAAATGGTTTGAAACGAAAGAATCCTCCTATACGAAATGCACAATCATGTCATGCAAAGGCTCTTCAATA

Function

symbol description
cuta Enables enzyme binding activity. Involved in protein localization. Located in membrane.

NR:

description
CutA homolog precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1630663 True 1333 lncRNA 0.45 5 17133884 17137231

Neighbor

gene id symbol gene type direction distance location
LOC110495066 rayl coding downstream 25217 17089024 ~ 17108667 (-)
LOC110493425 LOC106594459 coding downstream 146110 16980733 ~ 16987774 (-)
LOC110494935 LOC106590780 coding downstream 165289 16939303 ~ 16968595 (-)
LOC110495067 LOC106590617 coding downstream 200318 16860390 ~ 16933566 (-)
LOC110494924 LOC106592628 coding downstream 297169 16819145 ~ 16836715 (-)
LOC110495065 LOC106564434 coding upstream 4832 17142063 ~ 17146929 (-)
LOC110526382 LOC107087645 coding upstream 100030 17237261 ~ 17248548 (-)
LOC118940342 LOC106590876 coding upstream 142627 17279858 ~ 17296635 (-)
LOC110526262 LOC106590884 coding upstream 159642 17296873 ~ 17301197 (-)
LOC118940344 LOC106590712 coding upstream 586047 17723278 ~ 17727642 (-)
G1424354 NA non-coding downstream 758 17132710 ~ 17133126 (-)
G1424342 NA non-coding downstream 1420 17131319 ~ 17132464 (-)
G1424351 NA non-coding downstream 11385 17121987 ~ 17122499 (-)
G1424337 NA non-coding downstream 49524 17082021 ~ 17084360 (-)
G1424309 NA non-coding downstream 70374 16998504 ~ 17063510 (-)
G1424474 NA non-coding upstream 113588 17250819 ~ 17254840 (-)
G1424475 cyh2 non-coding upstream 122111 17259342 ~ 17268396 (-)
G1424476 NA non-coding upstream 133626 17270857 ~ 17276918 (-)
G1424541 NA non-coding upstream 308333 17445564 ~ 17446514 (-)
G1424553 NA non-coding upstream 327219 17464450 ~ 17467690 (-)
G1424218 NA other downstream 195185 16855477 ~ 16938699 (-)
G1424227 NA other downstream 282398 16850751 ~ 16851486 (-)
G1424234 NA other downstream 360927 16770437 ~ 16772957 (-)
LOC110508387 LOC106599573 other downstream 475354 16564951 ~ 16674565 (-)
G1424547 NA other upstream 319698 17456929 ~ 17457504 (-)
G1425321 NA other upstream 771834 17909065 ~ 17911376 (-)
G1425419 NA other upstream 1182700 18319931 ~ 18326899 (-)
LOC110487190 LOC106564382 other upstream 1222362 18359593 ~ 18494120 (-)
G1425652 NA other upstream 1488525 18625756 ~ 18627041 (-)

Expression


Co-expression Network