G1425219


Basic Information

Item Value
gene id G1425219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 17606544 ~ 17608785 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1631699
CCACCTCAGCCAATCGGATCTGCGATACAAACACACAGAATTCCAACAGAGCACATTATGTTATTCAATACACCCGATTTCTTATGTGAAAAGTGTGAGAAACACTTTATTTTTGGTAAAAATATTATGATTCATTATAAGCGCATTTAAAGTGCCAAATAATGCATATACAGTGCACAATAACACTTGCTATAAGCTGTCATAACAACTCATACAGTTCAAATGTGTTGCCCTGTATCCAGTGACTGACGAAAGTTGTAACTGACTAAAGTTGTATCTGACTAAAGTTGTAACTGACTAAAGTTGTATCTGACTAAAGTTGTAACTGACTAAAGCTGTAACTGACTAAAGTTGTAATGGACTAAAGTTGTAACTGACTAAAGTAGAGACTGACTAAAGTTGTAATGGACTAAAGTTGTAACGAACTAAAGTTGTAACGGACTAAAGTTGTAACGGACTAAAGTTGTAACAGACTAAAGTTGTAACGGACTAAAGTTGTAACGGACTAAAGTTGTAATGGACTAAAGTTGTATCTGACTAAAGTTGTAACGGACTAAAGTAGAAACTGACTAAAGTAGAAACTGACTAAAGTTGTAACGGACTAAAGTTGTAACAAACTAAAGTTGTAACGGACTAAAGTTGTAACGAACTAAAGTTGTAACGGACTAAAGTTGTAACGGACTAAAGTTGTAACGGACTAAAGTTGTAACGGACTAAAGTTGTAACTGACTAAAGTTGTAACGGACTAAAGTTGTAACGGACTAAAGTTGTAACGAACTAAAGTTGTAACGGACTAAAGTTGTAACGGACTAAAGTTGTAACTGACTAAAGTTGTAACGGACTAAATTTGTAACTGACTAAAGTTGTAACGGACAAAAGTTGTAACTGACTAAAGTTGTAACAAACTAAAGTTGTAACTGACTAAAGTAGAGACTGACTAAAGTTGTAACGGACTAAAGTTGTAACGAACTAAAGTTGTAACGAACTAAAGTTGTAACGGACTAAAGTTGTAACTGACTAAAGTTGTAACGCACAAAAGTTGTAACGGACTAAAGTTGTAACTGACTAAAGTTGTAACGGACTAAATTTGTAACTGACAAAAGTTGTAACGGACTAAAGTTGTAACGGACTAAAGTTGTAACGAACTAAAGTTGTAACTGACTAAAGTAGTAACTGACTAAAGTTGTAACAGACAAAAGTTGTAACTGACTAAAGTAGTAACTGACTAAAGTAGTAACTGACTAAAGTAGTAACTGACTAAAGTAGTAACGGACTAAAGTTGTAACTGACTAAAGTTGTAACTGACTAAAGTTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106613400

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1631699 True 1314 lncRNA 0.34 3 17606544 17608785

Neighbor

gene id symbol gene type direction distance location
LOC110526262 LOC106590884 coding downstream 305347 17296873 ~ 17301197 (-)
LOC118940342 LOC106590876 coding downstream 309909 17279858 ~ 17296635 (-)
LOC110526382 LOC107087645 coding downstream 357996 17237261 ~ 17248548 (-)
LOC110495065 LOC106564434 coding downstream 459615 17142063 ~ 17146929 (-)
LOC110495066 rayl coding downstream 497877 17089024 ~ 17108667 (-)
LOC118940344 LOC106590712 coding upstream 114493 17723278 ~ 17727642 (-)
LOC118940345 LOC106590757 coding upstream 311436 17920221 ~ 17929855 (-)
LOC118940346 LOC106593718 coding upstream 610574 18219359 ~ 18239809 (-)
LOC118936554 trmt1 coding upstream 673642 18275795 ~ 18303884 (-)
LOC110511293 LOC106590640 coding upstream 718875 18327660 ~ 18346508 (-)
G1425218 NA non-coding downstream 203 17606106 ~ 17606341 (-)
G1425217 NA non-coding downstream 1163 17605152 ~ 17605381 (-)
G1425213 NA non-coding downstream 9828 17596499 ~ 17596716 (-)
G1425211 NA non-coding downstream 13616 17592721 ~ 17592928 (-)
G1425210 NA non-coding downstream 16780 17589163 ~ 17589764 (-)
G1425222 NA non-coding upstream 4744 17613529 ~ 17613821 (-)
G1425224 LOC106564420 non-coding upstream 11562 17620347 ~ 17622476 (-)
G1425225 NA non-coding upstream 13847 17622632 ~ 17622965 (-)
G1425226 NA non-coding upstream 14290 17623075 ~ 17623507 (-)
G1425230 NA non-coding upstream 20083 17628868 ~ 17631540 (-)
G1424547 NA other downstream 149040 17456929 ~ 17457504 (-)
LOC110494935 LOC106590780 other downstream 638189 16939303 ~ 16968595 (-)
G1424218 NA other downstream 667845 16855477 ~ 16938699 (-)
G1424227 NA other downstream 755058 16850751 ~ 16851486 (-)
G1424234 NA other downstream 833587 16770437 ~ 16772957 (-)
G1425321 NA other upstream 300280 17909065 ~ 17911376 (-)
G1425419 NA other upstream 711146 18319931 ~ 18326899 (-)
LOC110487190 LOC106564382 other upstream 750808 18359593 ~ 18494120 (-)
G1425652 NA other upstream 1016971 18625756 ~ 18627041 (-)
LOC110485574 LOC106564445 other upstream 1104444 18713229 ~ 18716461 (-)

Expression


Co-expression Network