G1425234


Basic Information

Item Value
gene id G1425234
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 17720441 ~ 17740515 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1631732
CAACATTAGTTCAGGCTTAAACATCAATTTAATGTTTTCATTCAAGTAAATAACCTTTTCAGTACTTTTAGAAGTCAAAGTTCATGCTGCACAGGAAAACACTCTTTAGTGTTGGGATAAATGGAAGTCATGGCAGTACTTCTTTAGGACAAACTGGTGTTTCCTTCCCTCGTTCCGTTTACCTGGTTCTCTTTGTTGCCGTCTTTACATAgcgtctcctcctcccccactgtCTGACGCAGACAGACAACCAGacagacgagggagagagagtgaaggagaaggAAAGAGTGACGGATGGGGAAAGTGTTAAGGAGGGGACGGGGAGACAAGTTTAATGGACGGAGGTCAGGAAAGATGAGAGGAACGAGTGATGGGGCCGACGataatggaggagaggagtgaacgAAAGTGGGATGAGGAGGAAAAAAGATGTACCGGTAAGTGGAATGAAAATTGAGAGCGGCAGAGAGGGATATTGGCAGACGAGTGTGAGGGTCAAGGAAAGGGAGGACTTTTTGAAAAGAGGGATTGTGAAAGACCGGGTGATGAACAATCATAAAAGCGCAGGATAAAGAAAGAGTGAAACGAGATGGAGGGGCATCGGAAGAGAGATTAGCCAGCATATTGGAAAAGAGAAAGCTGCTGGTacgacacacacaccaacctgtccAACTTTTAGAGTACAATACGCACACAGCATATTTTAGAGTACCATACGCATGCGCCAAATTGGGGTTACCCCGCCCGCTGTTTGTGAGTCTGATCGCAAGTATAGAATTGTACCACATCAGGTCTATAAAAAGTTTGGAATACTCTTGACAGCATTCCATTTACACACATGGTAAAAGTCACTAACAATATCTGATTAGAAAGAACACAAAAGGACCATTATTCTTGGAGTCATTTTATTAAACAAATAACAAGTTGTTTAGGTACAAAATTTACAAATGTCTCatccacaataaaaaaaaatgactgaTATGAAAAATGTTTGAAGCAGAGCATGAAATAAACATGTTCTCCATAATAAAAACGGAAACGCTATGATAGGAAACAGCGAGTGAGAACAAATCTGTTCAGGAAGTCATTTCCTAGACAGATTTGCCTGGTAGCTAGCAGATTTAGCCTTACGCAGCAGGGCATCAGGGTAGACTTCTCTGTGGCAAACAGTTCTTCTGGCAATCATTGAAACCTTCTTGGTAACAATGGCACTCAGCATGTCTGTGGGGGCTGTGCATGtctgtgggtggggttatatctttcCTGTCTGGCcttgtccgggggtgtcatcggatggggccacagtgtctcctgacccctcccgtctcagctgccagtatttatgctgcagtagtttatgtgtcggagggctagggtcagtttgttatatctggagtacttctgtcttatcgggtgtcctgtgtgaatttaagtatgctctctttctttctctcggaggacctgagccctaggaccatgcctcaggactacctggcatgatgactccttgctgtccccagtccacctggccgggctgctgctccagtttcaattgttctgcctgcagctatggaatcctgacctgttcaccggacgtgctacctgtcccagacctgctgttttcaactatctagagacagcaggagcggtagagagactcttaatgatcggctatgaaaagacaactgacatttactcctgaggtgctgacttgctgcaccctctacaaccactgtgattattattatttgaccatgctggtcatttatgaaaatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccacccctcatagcctggtacctctaggtttcttcctaggttctggcctttctagggactttttcctagccaccgtgcttctacacctgcgttgcttggtctttcaatcacccacgtgggtataaccaatcaggagatggcacgtgggtacctgcttctataaaccaatgaggagatgggagaggcaggacttgaagcgtgatctgcatcagaaatagaaaggagttctattttagcccttggtaaCACAGACGCTTGTTGATGAGggcgagcagtgtgggtgtaaTAACTGAATaacaggcctccttgctcgcatacgctttttcagttctataggttgaggtcagggctttgtgatggctactccaataccttgactttgttgtccttaagccattttgacacaacttcggaagtatgcttgtggtcaatgtccatttggaagacccatttgcgaccaagctttaacttcctgactgaggtcttgagatgttgcttccaagtatccacataattgtcctacctcgtgatgccatctattttctgaagtgcaccaggccATCTTTTAGCAAAGCACCCtcaccacatgatgctgccaccggtttggatggtgttcttcggcttgcgagcgtccccctttttcctacaatcataacaatggtcattatggccaaacagttctatttttgtttcatcagaccagaggacatttctccaaaaagtacgatctttgtccccatgtgcagttgcaaaccgtagtctggctttttttaatggtggttttggagcagtggcttcttccttgctgagtggactatcaggttatgttgatattggacttgttttactgtggatatcgatacttttgtacctgtttcctccagcatcttcacaaggtcctttgctgttgttctgggattgatttgcacttttatctctaggagacagaacacttctccatcctgagcggtatgacggctgcgtggtcccatggtgtttatacttgcgtactattgtttgtacagatgaacgtggtaccttcagtttggaaattgctcccaaggatgaaccagacttgtggaggtctacaacaaaaaacattgaggtcttggctgatttcttttgattttccaatgacgtcaagcaaagaggcattgagtttgaaggtaggccttgaaatacatccacaggtacacctccaattgactcaaattatgtcaattagcctatcagaagcttctaaagccatgacatcattttctggaattttccaagctgttcaaagaCACAGtgcacttagtgtatgtaaacttctgacccactggaattgtaatacagtgaattataagcgaaataatctgtctgtaaacaatttttggaaaaattatttgtggagtggttgaaaaacgagttttaatgactccaacctaagtgtatgtaaacttctgacttcaactgtaatctGTATTCAAGCAGTCCAGTCTGTGTTGTGGTTCTGTAGGTCCTGTTATTATTAACATCAATCAACTCAAGTTATTCAGACCAAATGGCTCATATAATCTGTATCCACGCTGTCCAGTCTGTGTTGTGGTTCTGTAGGTCCTGTTAGTCTATTTTGGCAGGATGAATAACACTAGACATTCCTGAGAGACAATTTACAGGACAACACGAAGAGACCTGCCTCAAGGCTTTGGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1631732 True 3526 lncRNA 0.44 2 17720441 17740515
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110526262 LOC106590884 coding downstream 419244 17296873 ~ 17301197 (-)
LOC118940342 LOC106590876 coding downstream 423806 17279858 ~ 17296635 (-)
LOC110526382 LOC107087645 coding downstream 471893 17237261 ~ 17248548 (-)
LOC110495065 LOC106564434 coding downstream 573512 17142063 ~ 17146929 (-)
LOC110495066 rayl coding downstream 611774 17089024 ~ 17108667 (-)
LOC118940345 LOC106590757 coding upstream 179706 17920221 ~ 17929855 (-)
LOC118940346 LOC106593718 coding upstream 478844 18219359 ~ 18239809 (-)
LOC118936554 trmt1 coding upstream 541912 18275795 ~ 18303884 (-)
LOC110511293 LOC106590640 coding upstream 587145 18327660 ~ 18346508 (-)
LOC110487190 LOC106564382 coding upstream 621210 18359593 ~ 18494120 (-)
G1425267 NA non-coding downstream 17230 17702694 ~ 17703211 (-)
G1425253 NA non-coding downstream 37322 17682233 ~ 17683119 (-)
G1425247 NA non-coding downstream 47498 17668987 ~ 17672943 (-)
G1425230 NA non-coding downstream 88901 17628868 ~ 17631540 (-)
G1425226 NA non-coding downstream 96934 17623075 ~ 17623507 (-)
G1425277 NA non-coding upstream 3282 17743797 ~ 17746083 (-)
G1425278 NA non-coding upstream 4361 17744876 ~ 17747254 (-)
G1425293 NA non-coding upstream 35583 17776098 ~ 17776570 (-)
G1425295 NA non-coding upstream 39117 17779632 ~ 17783382 (-)
G1425303 NA non-coding upstream 54043 17794558 ~ 17794807 (-)
G1424547 NA other downstream 262937 17456929 ~ 17457504 (-)
LOC110494935 LOC106590780 other downstream 752086 16939303 ~ 16968595 (-)
G1424218 NA other downstream 781742 16855477 ~ 16938699 (-)
G1424227 NA other downstream 868955 16850751 ~ 16851486 (-)
G1424234 NA other downstream 947484 16770437 ~ 16772957 (-)
G1425321 NA other upstream 168550 17909065 ~ 17911376 (-)
G1425419 NA other upstream 579416 18319931 ~ 18326899 (-)
G1425652 NA other upstream 885241 18625756 ~ 18627041 (-)
LOC110485574 LOC106564445 other upstream 972714 18713229 ~ 18716461 (-)

Expression

G1425234 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G1425234 Expression in each Bioproject

Bar chart with 21 bars.
G1425234 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network