Gene
RNA
| Item | Value |
|---|---|
| gene id | G1425844 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 19079948 ~ 19080199 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1632446 | True | 252 | lncRNA | 0.51 | 1 | 19079948 | 19080199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940350 | LOC106564453 | coding | downstream | 29567 | 19035825 ~ 19050381 (-) |
| LOC110485553 | LOC106590435 | coding | downstream | 47206 | 19029078 ~ 19032742 (-) |
| LOC110514184 | LOC106590506 | coding | downstream | 99054 | 18949455 ~ 18980894 (-) |
| LOC118940349 | LOC106590535 | coding | downstream | 358031 | 18720958 ~ 18721917 (-) |
| LOC110485574 | LOC106564445 | coding | downstream | 363487 | 18713229 ~ 18716461 (-) |
| LOC110485538 | mcrip2 | coding | upstream | 247473 | 19327672 ~ 19333234 (-) |
| LOC110485530 | LOC106589785 | coding | upstream | 254133 | 19334332 ~ 19342508 (-) |
| LOC110485544 | LOC106564456 | coding | upstream | 263400 | 19343599 ~ 19350789 (-) |
| cxcl12b | cxcl12b | coding | upstream | 342067 | 19419049 ~ 19432304 (-) |
| LOC110485531 | LOC106564462 | coding | upstream | 420025 | 19500224 ~ 19501417 (-) |
| G1425843 | NA | non-coding | downstream | 506 | 19079146 ~ 19079442 (-) |
| G1425842 | NA | non-coding | downstream | 1677 | 19077701 ~ 19078271 (-) |
| G1425841 | NA | non-coding | downstream | 4712 | 19074898 ~ 19075236 (-) |
| G1425839 | NA | non-coding | downstream | 6581 | 19072741 ~ 19073367 (-) |
| G1425815 | NA | non-coding | downstream | 73248 | 19006375 ~ 19006700 (-) |
| G1425849 | NA | non-coding | upstream | 8059 | 19088258 ~ 19088604 (-) |
| G1425858 | NA | non-coding | upstream | 21055 | 19101254 ~ 19101804 (-) |
| G1425827 | NA | non-coding | upstream | 21847 | 19102046 ~ 19105220 (-) |
| G1425864 | NA | non-coding | upstream | 31557 | 19111756 ~ 19112111 (-) |
| G1425865 | NA | non-coding | upstream | 34100 | 19114299 ~ 19114565 (-) |
| LOC110485549 | LOC106564452 | other | downstream | 18555 | 19050725 ~ 19093965 (-) |
| G1425753 | NA | other | downstream | 213016 | 18866190 ~ 18866932 (-) |
| G1425652 | NA | other | downstream | 452907 | 18625756 ~ 18627041 (-) |
| LOC110487190 | LOC106564382 | other | downstream | 706246 | 18359593 ~ 18494120 (-) |
| G1425986 | NA | other | upstream | 89181 | 19169380 ~ 19172677 (-) |
| G1426504 | NA | other | upstream | 719510 | 19799637 ~ 19803564 (-) |
| G1426547 | NA | other | upstream | 780102 | 19860301 ~ 19861663 (-) |
| LOC110485621 | NA | other | upstream | 939430 | 20019616 ~ 20021101 (-) |
| G1426626 | LOC106590134 | other | upstream | 981481 | 20061680 ~ 20063618 (-) |
