Gene
RNA
| Item | Value |
|---|---|
| gene id | G1425991 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 19177943 ~ 19178206 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1632637 | True | 264 | lncRNA | 0.31 | 1 | 19177943 | 19178206 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485549 | LOC106564452 | coding | downstream | 83978 | 19050725 ~ 19093965 (-) |
| LOC118940350 | LOC106564453 | coding | downstream | 127562 | 19035825 ~ 19050381 (-) |
| LOC110485553 | LOC106590435 | coding | downstream | 145201 | 19029078 ~ 19032742 (-) |
| LOC110514184 | LOC106590506 | coding | downstream | 197049 | 18949455 ~ 18980894 (-) |
| LOC118940349 | LOC106590535 | coding | downstream | 456026 | 18720958 ~ 18721917 (-) |
| LOC110485538 | mcrip2 | coding | upstream | 149466 | 19327672 ~ 19333234 (-) |
| LOC110485530 | LOC106589785 | coding | upstream | 156126 | 19334332 ~ 19342508 (-) |
| LOC110485544 | LOC106564456 | coding | upstream | 165393 | 19343599 ~ 19350789 (-) |
| cxcl12b | cxcl12b | coding | upstream | 244060 | 19419049 ~ 19432304 (-) |
| LOC110485531 | LOC106564462 | coding | upstream | 322018 | 19500224 ~ 19501417 (-) |
| G1425988 | NA | non-coding | downstream | 4740 | 19172861 ~ 19173203 (-) |
| G1425982 | NA | non-coding | downstream | 15533 | 19161686 ~ 19162410 (-) |
| G1425980 | NA | non-coding | downstream | 23222 | 19154297 ~ 19154721 (-) |
| G1425977 | NA | non-coding | downstream | 24878 | 19150036 ~ 19153065 (-) |
| G1425865 | NA | non-coding | downstream | 63378 | 19114299 ~ 19114565 (-) |
| G1425996 | NA | non-coding | upstream | 27908 | 19206114 ~ 19206346 (-) |
| G1426067 | NA | non-coding | upstream | 158223 | 19336429 ~ 19337208 (-) |
| G1426083 | NA | non-coding | upstream | 161789 | 19339995 ~ 19340389 (-) |
| G1426093 | NA | non-coding | upstream | 183508 | 19361714 ~ 19362253 (-) |
| G1425986 | NA | other | downstream | 5266 | 19169380 ~ 19172677 (-) |
| G1425753 | NA | other | downstream | 311011 | 18866190 ~ 18866932 (-) |
| LOC110485574 | LOC106564445 | other | downstream | 461559 | 18713229 ~ 18716461 (-) |
| G1425652 | NA | other | downstream | 550902 | 18625756 ~ 18627041 (-) |
| G1426504 | NA | other | upstream | 621503 | 19799637 ~ 19803564 (-) |
| G1426547 | NA | other | upstream | 682095 | 19860301 ~ 19861663 (-) |
| LOC110485621 | NA | other | upstream | 841423 | 20019616 ~ 20021101 (-) |
| G1426626 | LOC106590134 | other | upstream | 883474 | 20061680 ~ 20063618 (-) |
| G1427350 | LOC106589837 | other | upstream | 1071589 | 20249795 ~ 20250083 (-) |
