Gene
RNA
| Item | Value |
|---|---|
| gene id | G1426417 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 19568551 ~ 19568822 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1633126 | True | 272 | lncRNA | 0.38 | 1 | 19568551 | 19568822 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485541 | xpnpep1 | coding | downstream | 28863 | 19524837 ~ 19539688 (-) |
| LOC110485531 | LOC106564462 | coding | downstream | 67134 | 19500224 ~ 19501417 (-) |
| cxcl12b | cxcl12b | coding | downstream | 136343 | 19419049 ~ 19432304 (-) |
| LOC110485544 | LOC106564456 | coding | downstream | 217762 | 19343599 ~ 19350789 (-) |
| LOC110485530 | LOC106589785 | coding | downstream | 226043 | 19334332 ~ 19342508 (-) |
| LOC110485621 | NA | coding | upstream | 450794 | 20019616 ~ 20021101 (-) |
| LOC110487268 | NA | coding | upstream | 511432 | 20080254 ~ 20110329 (-) |
| LOC110485337 | LOC106590256 | coding | upstream | 813396 | 20382218 ~ 20391692 (-) |
| keap1b | LOC106564503 | coding | upstream | 824291 | 20393113 ~ 20413872 (-) |
| LOC110493429 | LOC106564504 | coding | upstream | 854875 | 20423697 ~ 20429216 (-) |
| G1426183 | NA | non-coding | downstream | 50317 | 19518024 ~ 19518234 (-) |
| G1426178 | NA | non-coding | downstream | 56219 | 19512130 ~ 19512332 (-) |
| G1426132 | NA | non-coding | downstream | 106308 | 19461960 ~ 19462243 (-) |
| G1426130 | NA | non-coding | downstream | 113490 | 19454848 ~ 19455061 (-) |
| G1426421 | NA | non-coding | upstream | 13308 | 19582130 ~ 19699901 (-) |
| G1426437 | NA | non-coding | upstream | 38366 | 19607188 ~ 19611121 (-) |
| G1426468 | NA | non-coding | upstream | 140329 | 19709151 ~ 19726246 (-) |
| G1426486 | NA | non-coding | upstream | 140850 | 19709672 ~ 19746346 (-) |
| G1426499 | NA | non-coding | upstream | 178137 | 19746959 ~ 19747181 (-) |
| G1425986 | NA | other | downstream | 395874 | 19169380 ~ 19172677 (-) |
| LOC110485549 | LOC106564452 | other | downstream | 507158 | 19050725 ~ 19093965 (-) |
| G1425753 | NA | other | downstream | 701619 | 18866190 ~ 18866932 (-) |
| LOC110485574 | LOC106564445 | other | downstream | 852167 | 18713229 ~ 18716461 (-) |
| G1425652 | NA | other | downstream | 941510 | 18625756 ~ 18627041 (-) |
| G1426504 | NA | other | upstream | 230887 | 19799637 ~ 19803564 (-) |
| G1426547 | NA | other | upstream | 291479 | 19860301 ~ 19861663 (-) |
| G1426626 | LOC106590134 | other | upstream | 492858 | 20061680 ~ 20063618 (-) |
| G1427350 | LOC106589837 | other | upstream | 680973 | 20249795 ~ 20250083 (-) |
