Gene
RNA
| Item | Value |
|---|---|
| gene id | G1426468 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 19709151 ~ 19726246 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1633188 | True | 330 | lncRNA | 0.46 | 2 | 19709151 | 19726246 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487230 | LOC106590349 | coding | downstream | 128124 | 19540854 ~ 19581027 (-) |
| LOC110485541 | xpnpep1 | coding | downstream | 169463 | 19524837 ~ 19539688 (-) |
| LOC110485531 | LOC106564462 | coding | downstream | 207734 | 19500224 ~ 19501417 (-) |
| cxcl12b | cxcl12b | coding | downstream | 276943 | 19419049 ~ 19432304 (-) |
| LOC110485544 | LOC106564456 | coding | downstream | 358362 | 19343599 ~ 19350789 (-) |
| LOC110485621 | NA | coding | upstream | 293370 | 20019616 ~ 20021101 (-) |
| LOC110487268 | NA | coding | upstream | 354008 | 20080254 ~ 20110329 (-) |
| LOC110485337 | LOC106590256 | coding | upstream | 655972 | 20382218 ~ 20391692 (-) |
| keap1b | LOC106564503 | coding | upstream | 666867 | 20393113 ~ 20413872 (-) |
| LOC110493429 | LOC106564504 | coding | upstream | 697451 | 20423697 ~ 20429216 (-) |
| G1426421 | NA | non-coding | downstream | 9250 | 19582130 ~ 19699901 (-) |
| G1426437 | NA | non-coding | downstream | 98030 | 19607188 ~ 19611121 (-) |
| G1426417 | NA | non-coding | downstream | 140329 | 19568551 ~ 19568822 (-) |
| G1426183 | NA | non-coding | downstream | 190917 | 19518024 ~ 19518234 (-) |
| G1426178 | NA | non-coding | downstream | 196819 | 19512130 ~ 19512332 (-) |
| G1426499 | NA | non-coding | upstream | 20713 | 19746959 ~ 19747181 (-) |
| G1426501 | NA | non-coding | upstream | 24065 | 19750311 ~ 19750521 (-) |
| G1426502 | NA | non-coding | upstream | 24839 | 19751085 ~ 19751340 (-) |
| G1426503 | NA | non-coding | upstream | 25254 | 19751500 ~ 19751862 (-) |
| G1426505 | NA | non-coding | upstream | 28040 | 19754286 ~ 19755395 (-) |
| G1425986 | NA | other | downstream | 536474 | 19169380 ~ 19172677 (-) |
| LOC110485549 | LOC106564452 | other | downstream | 647758 | 19050725 ~ 19093965 (-) |
| G1425753 | NA | other | downstream | 842219 | 18866190 ~ 18866932 (-) |
| LOC110485574 | LOC106564445 | other | downstream | 992767 | 18713229 ~ 18716461 (-) |
| G1425652 | NA | other | downstream | 1082110 | 18625756 ~ 18627041 (-) |
| G1426504 | NA | other | upstream | 73463 | 19799637 ~ 19803564 (-) |
| G1426547 | NA | other | upstream | 134055 | 19860301 ~ 19861663 (-) |
| G1426626 | LOC106590134 | other | upstream | 335434 | 20061680 ~ 20063618 (-) |
| G1427350 | LOC106589837 | other | upstream | 523549 | 20249795 ~ 20250083 (-) |
