G1426505


Basic Information

Item Value
gene id G1426505
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 19754286 ~ 19755395 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1633247
ATCACATTATGGCAGCATTGTTATCGGTCATTCAGCTTATTATTGAGAAAGTCAAATGAATGACAGTTAATTTATTTGTTTAGATCAACATACATAACCAGATATTCTGCCGCTTCCAATAACCTCTGGATGTTCATCAACTGCACTGCCGTCATTCTGCTGGAGCTAGCGAACGTTAGCGAAACCTTTCTACAACTTGTGATACTATTTCAAAGACAGGTACTATTGCGGTTCAAGATCCAAAATCGGAATAATTGTTCCTCGTTGAGTATAACACAAAACGTTACTTCATGAATGTCTTCGTCTTGTTAGCTATTTTGTTTGCTGGCTCTGTAATTAAAAGCCCTGTCGAAAAATATCTGCCCAGTTTTAATATGCAACACAGGTAGCAGCCTAGTGATTCAGGTTTTCAGCCGTTTCAAAAATCGAAAAACGAGTGTGGCAAAGTATTCAAAGTATTCAGGAAAAACAGTTACAAATGGTATAAAATGAATAGAAACTACATCAAATGTCCACCCAAAGCCTGAAAAGTCCCTGCTGCTGCCTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1633247 True 549 lncRNA 0.38 2 19754286 19755395

Neighbor

gene id symbol gene type direction distance location
LOC110487230 LOC106590349 coding downstream 173259 19540854 ~ 19581027 (-)
LOC110485541 xpnpep1 coding downstream 214598 19524837 ~ 19539688 (-)
LOC110485531 LOC106564462 coding downstream 252869 19500224 ~ 19501417 (-)
cxcl12b cxcl12b coding downstream 322078 19419049 ~ 19432304 (-)
LOC110485544 LOC106564456 coding downstream 403497 19343599 ~ 19350789 (-)
LOC110485621 NA coding upstream 264221 20019616 ~ 20021101 (-)
LOC110487268 NA coding upstream 324859 20080254 ~ 20110329 (-)
LOC110485337 LOC106590256 coding upstream 626823 20382218 ~ 20391692 (-)
keap1b LOC106564503 coding upstream 637718 20393113 ~ 20413872 (-)
LOC110493429 LOC106564504 coding upstream 668302 20423697 ~ 20429216 (-)
G1426503 NA non-coding downstream 2424 19751500 ~ 19751862 (-)
G1426502 NA non-coding downstream 2946 19751085 ~ 19751340 (-)
G1426501 NA non-coding downstream 3765 19750311 ~ 19750521 (-)
G1426499 NA non-coding downstream 7105 19746959 ~ 19747181 (-)
G1426486 NA non-coding downstream 7940 19709672 ~ 19746346 (-)
G1426504 NA non-coding upstream 44242 19799637 ~ 19803564 (-)
G1426527 NA non-coding upstream 52271 19807666 ~ 19807926 (-)
G1426528 NA non-coding upstream 56060 19811455 ~ 19811820 (-)
G1426530 NA non-coding upstream 58741 19814136 ~ 19814465 (-)
G1426531 NA non-coding upstream 60281 19815676 ~ 19815901 (-)
G1425986 NA other downstream 581609 19169380 ~ 19172677 (-)
LOC110485549 LOC106564452 other downstream 692893 19050725 ~ 19093965 (-)
G1425753 NA other downstream 887354 18866190 ~ 18866932 (-)
LOC110485574 LOC106564445 other downstream 1037902 18713229 ~ 18716461 (-)
G1425652 NA other downstream 1127245 18625756 ~ 18627041 (-)
G1426547 NA other upstream 104906 19860301 ~ 19861663 (-)
G1426626 LOC106590134 other upstream 306285 20061680 ~ 20063618 (-)
G1427350 LOC106589837 other upstream 494400 20249795 ~ 20250083 (-)

Expression


Co-expression Network