Gene
RNA
| Item | Value |
|---|---|
| gene id | G1426531 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 19815676 ~ 19815901 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1633275 | True | 226 | lncRNA | 0.47 | 1 | 19815676 | 19815901 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487230 | LOC106590349 | coding | downstream | 234649 | 19540854 ~ 19581027 (-) |
| LOC110485541 | xpnpep1 | coding | downstream | 275988 | 19524837 ~ 19539688 (-) |
| LOC110485531 | LOC106564462 | coding | downstream | 314259 | 19500224 ~ 19501417 (-) |
| cxcl12b | cxcl12b | coding | downstream | 383468 | 19419049 ~ 19432304 (-) |
| LOC110485544 | LOC106564456 | coding | downstream | 464887 | 19343599 ~ 19350789 (-) |
| LOC110485621 | NA | coding | upstream | 203715 | 20019616 ~ 20021101 (-) |
| LOC110487268 | NA | coding | upstream | 264353 | 20080254 ~ 20110329 (-) |
| LOC110485337 | LOC106590256 | coding | upstream | 566317 | 20382218 ~ 20391692 (-) |
| keap1b | LOC106564503 | coding | upstream | 577212 | 20393113 ~ 20413872 (-) |
| LOC110493429 | LOC106564504 | coding | upstream | 607796 | 20423697 ~ 20429216 (-) |
| G1426530 | NA | non-coding | downstream | 1211 | 19814136 ~ 19814465 (-) |
| G1426528 | NA | non-coding | downstream | 3856 | 19811455 ~ 19811820 (-) |
| G1426527 | NA | non-coding | downstream | 7750 | 19807666 ~ 19807926 (-) |
| G1426504 | NA | non-coding | downstream | 12112 | 19799637 ~ 19803564 (-) |
| G1426505 | NA | non-coding | downstream | 60281 | 19754286 ~ 19755395 (-) |
| G1426543 | NA | non-coding | upstream | 23458 | 19839359 ~ 19839585 (-) |
| G1426545 | NA | non-coding | upstream | 39668 | 19855569 ~ 19856134 (-) |
| G1426546 | LOC106590170 | non-coding | upstream | 40427 | 19856328 ~ 19858625 (-) |
| G1426557 | NA | non-coding | upstream | 80777 | 19896678 ~ 19896880 (-) |
| G1426565 | NA | non-coding | upstream | 106410 | 19922311 ~ 19922511 (-) |
| G1425986 | NA | other | downstream | 642999 | 19169380 ~ 19172677 (-) |
| LOC110485549 | LOC106564452 | other | downstream | 754283 | 19050725 ~ 19093965 (-) |
| G1425753 | NA | other | downstream | 948744 | 18866190 ~ 18866932 (-) |
| LOC110485574 | LOC106564445 | other | downstream | 1099292 | 18713229 ~ 18716461 (-) |
| G1426547 | NA | other | upstream | 44400 | 19860301 ~ 19861663 (-) |
| G1426626 | LOC106590134 | other | upstream | 245779 | 20061680 ~ 20063618 (-) |
| G1427350 | LOC106589837 | other | upstream | 433894 | 20249795 ~ 20250083 (-) |
| LOC118940353 | LOC106590316 | other | upstream | 723975 | 20537413 ~ 20542283 (-) |
