Gene
RNA
| Item | Value |
|---|---|
| gene id | G1426545 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 19855569 ~ 19856134 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Dual specificity protein phosphatase 5 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1633289 | True | 566 | lncRNA | 0.46 | 1 | 19855569 | 19856134 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487230 | LOC106590349 | coding | downstream | 274542 | 19540854 ~ 19581027 (-) |
| LOC110485541 | xpnpep1 | coding | downstream | 315881 | 19524837 ~ 19539688 (-) |
| LOC110485531 | LOC106564462 | coding | downstream | 354152 | 19500224 ~ 19501417 (-) |
| cxcl12b | cxcl12b | coding | downstream | 423361 | 19419049 ~ 19432304 (-) |
| LOC110485544 | LOC106564456 | coding | downstream | 504780 | 19343599 ~ 19350789 (-) |
| LOC110485621 | NA | coding | upstream | 163482 | 20019616 ~ 20021101 (-) |
| LOC110487268 | NA | coding | upstream | 224120 | 20080254 ~ 20110329 (-) |
| LOC110485337 | LOC106590256 | coding | upstream | 526084 | 20382218 ~ 20391692 (-) |
| keap1b | LOC106564503 | coding | upstream | 536979 | 20393113 ~ 20413872 (-) |
| LOC110493429 | LOC106564504 | coding | upstream | 567563 | 20423697 ~ 20429216 (-) |
| G1426543 | NA | non-coding | downstream | 15984 | 19839359 ~ 19839585 (-) |
| G1426531 | NA | non-coding | downstream | 39668 | 19815676 ~ 19815901 (-) |
| G1426530 | NA | non-coding | downstream | 41104 | 19814136 ~ 19814465 (-) |
| G1426528 | NA | non-coding | downstream | 43749 | 19811455 ~ 19811820 (-) |
| G1426527 | NA | non-coding | downstream | 47643 | 19807666 ~ 19807926 (-) |
| G1426546 | LOC106590170 | non-coding | upstream | 194 | 19856328 ~ 19858625 (-) |
| G1426557 | NA | non-coding | upstream | 40544 | 19896678 ~ 19896880 (-) |
| G1426565 | NA | non-coding | upstream | 66177 | 19922311 ~ 19922511 (-) |
| G1426568 | NA | non-coding | upstream | 73324 | 19929458 ~ 19929748 (-) |
| G1426569 | NA | non-coding | upstream | 75371 | 19931505 ~ 19931737 (-) |
| G1426504 | NA | other | downstream | 52005 | 19799637 ~ 19803564 (-) |
| G1425986 | NA | other | downstream | 682892 | 19169380 ~ 19172677 (-) |
| LOC110485549 | LOC106564452 | other | downstream | 794176 | 19050725 ~ 19093965 (-) |
| G1425753 | NA | other | downstream | 988637 | 18866190 ~ 18866932 (-) |
| LOC110485574 | LOC106564445 | other | downstream | 1139185 | 18713229 ~ 18716461 (-) |
| G1426547 | NA | other | upstream | 4167 | 19860301 ~ 19861663 (-) |
| G1426626 | LOC106590134 | other | upstream | 205546 | 20061680 ~ 20063618 (-) |
| G1427350 | LOC106589837 | other | upstream | 393661 | 20249795 ~ 20250083 (-) |
| LOC118940353 | LOC106590316 | other | upstream | 683742 | 20537413 ~ 20542283 (-) |
