G1427470


Basic Information

Item Value
gene id G1427470
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 20553196 ~ 20556892 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1634354
TTTTTGTTGAACAAATTTCAAACAGTATAACTGACTTTACAAAAATGGATTTGACAGGTAGAAATATGACAGTAGTAATGGCTAAATCTTGAGATTGTAAATGAAAAAGGATTTCATTTTGCTCTCATTTTCACAGTGACATTGATAAATGATACAGAAATTTCACAAAATGTTCAGGAGTACTAGTCTATTTCTAGTGTACTAGTGATTTTATACTGGTGGACATTGAGTCAGTCAGACACATGAACATGTATCAATATCATACACATCCTAACTCATAGTTTAATGTGGCTACATTCAACACAGGAACTATGAGAATTTATATTACTAAGTTATTACTTACTTCTGtacagtatttagttttttttaacaaCTTTTAAAACTATttaggatcaacaacattataaaATATGGGGTCCTTCATCCTCTTTAAGGTCTTTAAAGTACAAAAATACTGCCACCATCATCTAGGTCCAGGGTAATCTTCTGTTATGGACGGATACAACTTTGCTGAAAACACTTCTTTACAACTTTAAAAAGCATAGATTCCCATGCCAACCGTTGCCAGGGCTACACAGATCCCCAGCACCATTCTGAAGAGGGGTGATGCGTTGACCAGACTGGTCTGGATCTGAAGGGATCTAACTGTCAGTTTCTCTCCATCAGCCAGTTTGGAATGTGTCGACGAGTGTCTTGTGCATCTATTTCTGGTTGTCGTATGCATGAGctcactttccctctctgtcacagaCACCATCTTCTGAAGATCGTCAAAGACctGGATGTTCAACTCGAAGGCTCTGACAGCCTCCTCCAgcattcctttcctctcctcttcctccagctcGATGCTGTTCATTCTACTCCTGTACAGCTGTTTGAACAGGTTGGGGCTGCTCACGCCCGGGAAGGAAAAGAACGACAGACCCTCGCCACCCTTCAGCCCCAGAGACTTCTGGGTAATGCGGCCAAGGACTTGTCCGCCAGATAGGTCGCCGAGGTAGCGGGTGTACGCGTGGGCCACTAGGTACTCAGGGTTGTCTTTGCCGAtCTGTCTGAGTCTATGGGCATATATTTTAGTGGCAGCCGGTACAACAATCTTCTCTCTCCAGTCCTGCCCATAGAAATGCTCCAGGTCTCTCTCCACTGACTCCAGCCGTGCTAGTTCCAGGGGGAAGTATATAGGCGCGACACTCGGGTGGTTGGAGTTGTTGTCCAGAGCTTCCTCTAGTGCTTGATAGATCTCATAGAGGGAGCACAGGAGAAGCTTGTACTGTGTCAGACTGACGTTTCCTCTCTGGTAGGCCAGCATCAGCTCAGTGTTCTCTGCTCTGACATGGCTGTCCTTGGTCACAGCCTTAATCTGCTCAGACAGAtcaCTGTCTGTGAGCTCCACTTGTGTCTTCATCTTCTTGTCTGTCTCCATATCAGTTCACAAGTTATACAATAGTTGGTCCTTTCTTTGTTGTTATATTCCCACAATGAGAGActgtcttctccttctctctctctctctctctctctctttctttctttctttctttctttctttcttcctaaGTGTACAATCCTTATTTTGTGTGCCTCCTCTCCgg
>TU1634362
tcctccatcctcctcacctGGATGTTCAACTCGAAGGCTCTGACAGCCTCCTCCAgcattcctttcctctcctcttcctccagctcGATGCTGTTCATTCTACTCCTGTACAGCTGTTTGAACAGGTTGGGGCTGCTCACGCCCGGGAAGGAAAAGAACGACAGACCCTCGCCACCCTTCAGCCCCAGAGACTTCTGGGTAATGCGGCCAAGGACTTGTCCGCCAGATAGGTCGCCGAGGTAGCGGGTGTACGCGTGGGCCACTAGGTACTCAGGGTTGTCTTTGCCGAtctgtggagggaaggagagagagtcagtaCAGTCACTGGTGTGAATGCACTATAAACCCATTtttttattatctcaACTTCTAACGTTTGGCTGAATTTACATTGGATTTTTGAAACCCTCATTTGCCCCCTTCATGGTTACATAAGGCAGGTTTCCTAAACTCGGTCTTGGGGCCCATTCTGGGTACACGTTTAGTTTTTTACCCTAGCACTAAACagatgattcaaataatcaaaggtTGATGATGAGGtagttatttgaatcagctgtgtggtgctGGGGCAAAAACTAAAATGTGCACCCAGAGGAGGCCcctggaccgagtttgggaaacactgttatAAAGCATTATGGTACGATTCAACTTCCACAGAGCAGTCCAGTTTAATACACACCTGTCTGAGTCTATGGGCATATATTTTAGTGGCAGCCGGTACAACAATCTTCTCTCTCCAGTCCTGCCCATAGAAATGCTCCAGGTCTCTCTCCACTGACTCCAGCCGTGCTAGTTCCAGGGGGAAGTATATAGGCGCGACACTCGGGTGGTTGGAGTTGTTGTCCAGAGCTTCCTCTAGTGCTTGATAGATCTCATAGAGGGAGCACAGGAGAAGctgaggaaaggagacaaggaaaggatATAAACTAGGGTTAGTCTCAATACTTCCATTATACATAAAACACAGC
>TU1634360
TTTTTGTTGAACAAATTTCAAACAGTATAACTGACTTTACAAAAATGGATTTGACAGGTAGAAATATGACAGTAGTAATGGCTAAATCTTGAGATTGTAAATGAAAAAGGATTTCATTTTGCTCTCATTTTCACAGTGACATTGATAAATGATACAGAAATTTCACAAAATGTTCAGGAGTACTAGTCTATTTCTAGTGTACTAGTGATTTTATACTGGTGGACATTGAGTCAGTCAGACACATGAACATGTATCAATATCATACACATCCTAACTCATAGTTTAATGTGGCTACATTCAACACAGGAACTATGAGAATTTATATTACTAAGTTATTACTTACTTCTGtacagtatttagttttttttaacaaCTTTTAAAACTATttaggatcaacaacattataaaATATGGGGTCCTTCATCCTCTTTAAGGTCTTTAAAGTACAAAAATACTGCCACCATCATCTAGGTCCAGGGTAATCTTCTGTTATGGACGGATACAACTTTGCTGAAAACACTTCTTTACAACTTTAAAAAGCATAGATTCCCATGCCAACCGTTGCCAGGGCTACACAGATCCCCAGCACCATTCTGAAGAGGGGTGATGCGTTGACCAGACTGGTCTGGATCTGAAGGGATCTAACTGTCAGTTTCTCTCCTGAGAAAAGAGGAAAGGAGGAATTATGAGTATTATCTAACACACTAACTGCATAAGTACTAAATATCACCGTCATCATATTcagtcgtgtgtgtgtgtccgtgcgtgtggtgtgtgtgtgcgtgcatgcgtgcgttcGCACATGCGTGTgcctatgcatgtgtgtgtgtgtctatgcctatgcgtgtgtgtgtgtgtgtgtgtctgtgtgtgcgcgtaaCTTACCATCAGCCAGTTTGGAATGTGTCGACGAGTGTCTTGTGCATCTATTTCTGGTTGTCGTATGCATGAGctcactttccctctctgtcacagaCACCATCTTCTGAAGATCGTCAAAGACCTGCATCACAGACAGAGGCAAGACAACATCAGTCAAAAGTCAGTCGTCTTATGTACGAAGAGCCAAGAAGctcataaaaaaaactaaatggcACTCACTTAGCTTATAGTTGAACACCAACCCTAATATCTAACCTTATATCACCCCTAAACC

Function

NR:

description
PREDICTED: heme oxygenase-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1634354 False 1595 TUCP 0.44 7 20553196 20556892
TU1634362 False 974 lncRNA 0.48 2 20554620 20555620
TU1634360 True 1156 lncRNA 0.39 2 20555693 20556892
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110485519 LOC106590222 coding downstream 4531 20547837 ~ 20550089 (-)
LOC118940353 LOC106590316 coding downstream 12337 20537413 ~ 20542283 (-)
LOC110493429 LOC106564504 coding downstream 125404 20423697 ~ 20429216 (-)
keap1b LOC106564503 coding downstream 140748 20393113 ~ 20413872 (-)
LOC110485337 LOC106590256 coding downstream 162928 20382218 ~ 20391692 (-)
LOC110485645 LOC106590024 coding upstream 10517 20567409 ~ 20571074 (-)
LOC110485646 LOC106589946 coding upstream 20761 20512356 ~ 20731967 (-)
LOC110511666 LOC106589939 coding upstream 229571 20785995 ~ 20787989 (-)
LOC110519576 LOC106589920 coding upstream 231574 20788466 ~ 20795116 (-)
LOC110485651 LOC106589910 coding upstream 240453 20797345 ~ 20804443 (-)
G1427496 NA non-coding downstream 27108 20509023 ~ 20527512 (-)
G1427510 NA non-coding downstream 29012 20524793 ~ 20525608 (-)
G1427453 NA non-coding downstream 117695 20433612 ~ 20436925 (-)
G1427449 NA non-coding downstream 133549 20420868 ~ 20421071 (-)
G1427414 NA non-coding downstream 145658 20407502 ~ 20408962 (-)
G1427523 NA non-coding upstream 4691 20561583 ~ 20562251 (-)
G1427537 NA non-coding upstream 63648 20620540 ~ 20621512 (-)
G1427538 NA non-coding upstream 68742 20625634 ~ 20627583 (-)
G1427504 NA non-coding upstream 121931 20678823 ~ 20679953 (-)
G1427605 NA non-coding upstream 212388 20769280 ~ 20770045 (-)
G1427350 LOC106589837 other downstream 304537 20249795 ~ 20250083 (-)
G1426626 LOC106590134 other downstream 491002 20061680 ~ 20063618 (-)
LOC110485621 NA other downstream 533562 20019616 ~ 20021101 (-)
G1426547 NA other downstream 692957 19860301 ~ 19861663 (-)
G1427608 NA other upstream 215634 20772526 ~ 20774375 (-)
G1427703 NA other upstream 450649 21007541 ~ 21032030 (-)
LOC110493443 NA other upstream 850190 21407072 ~ 21409247 (-)
G1428161 LOC106564449 other upstream 1069785 21626677 ~ 21627280 (-)

Expression

G1427470 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 80.
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G1427470 Expression in each Bioproject

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G1427470 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 3000.
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Co-expression Network