Gene
RNA
| Item | Value |
|---|---|
| gene id | G1427860 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 21349720 ~ 21349992 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1634868 | True | 273 | lncRNA | 0.45 | 1 | 21349720 | 21349992 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493449 | LOC106564566 | coding | downstream | 55769 | 21292152 ~ 21293951 (-) |
| LOC110493451 | LOC106564568 | coding | downstream | 63012 | 21274885 ~ 21286708 (-) |
| LOC118940357 | LOC106589359 | coding | downstream | 128935 | 21214710 ~ 21220785 (-) |
| LOC110485675 | LOC106564530 | coding | downstream | 138056 | 21195654 ~ 21211664 (-) |
| LOC110487282 | LOC106589400 | coding | downstream | 155111 | 21187120 ~ 21194609 (-) |
| LOC110493447 | LOC106564561 | coding | upstream | 3202 | 21353194 ~ 21360283 (-) |
| ntan1 | ntan1 | coding | upstream | 14158 | 21364150 ~ 21367378 (-) |
| LOC110493446 | LOC106589449 | coding | upstream | 27794 | 21377786 ~ 21385648 (-) |
| LOC110493443 | NA | coding | upstream | 57080 | 21407072 ~ 21409247 (-) |
| LOC110493441 | sox10 | coding | upstream | 61634 | 21411626 ~ 21417430 (-) |
| G1427858 | NA | non-coding | downstream | 17252 | 21327500 ~ 21332468 (-) |
| G1427854 | NA | non-coding | downstream | 24911 | 21324527 ~ 21324809 (-) |
| G1427811 | NA | non-coding | downstream | 86767 | 21262666 ~ 21262953 (-) |
| G1427797 | NA | non-coding | downstream | 100615 | 21248843 ~ 21249105 (-) |
| G1427796 | NA | non-coding | downstream | 101496 | 21248024 ~ 21248224 (-) |
| G1427809 | NA | non-coding | upstream | 10560 | 21360552 ~ 21361055 (-) |
| G1427872 | LOC106589436 | non-coding | upstream | 48495 | 21398487 ~ 21399227 (-) |
| G1427871 | NA | non-coding | upstream | 49695 | 21399687 ~ 21400050 (-) |
| G1427879 | NA | non-coding | upstream | 72673 | 21422665 ~ 21423590 (-) |
| G1427880 | NA | non-coding | upstream | 73620 | 21423612 ~ 21424091 (-) |
| G1427703 | NA | other | downstream | 338400 | 21007541 ~ 21032030 (-) |
| LOC110511666 | LOC106589939 | other | downstream | 562135 | 20785995 ~ 20787989 (-) |
| G1427608 | NA | other | downstream | 575345 | 20772526 ~ 20774375 (-) |
| G1427470 | NA | other | downstream | 792828 | 20553196 ~ 20556892 (-) |
| LOC118940353 | LOC106590316 | other | downstream | 808539 | 20537413 ~ 20542283 (-) |
| G1428161 | LOC106564449 | other | upstream | 276685 | 21626677 ~ 21627280 (-) |
| G1428291 | LOC106588995 | other | upstream | 454339 | 21804331 ~ 21804660 (-) |
| G1428740 | NA | other | upstream | 989387 | 22339379 ~ 22340563 (-) |
| G1429642 | NA | other | upstream | 1904330 | 23254322 ~ 23254592 (-) |
