Gene
RNA
| Item | Value |
|---|---|
| gene id | G1427894 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 21450974 ~ 21451202 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: PH domain-containing protein DDB_G0275795-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1634904 | True | 229 | lncRNA | 0.49 | 1 | 21450974 | 21451202 |
21,450,000
21,450,400
21,450,800
21,451,200
21,451,600
21,452,000
21,452,400
21,452,800
21,453,200
21,453,600
21,454,000
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493440 | LOC106564549 | coding | downstream | 11487 | 21429348 ~ 21439487 (-) |
| LOC110493441 | sox10 | coding | downstream | 33544 | 21411626 ~ 21417430 (-) |
| LOC110493443 | NA | coding | downstream | 41727 | 21407072 ~ 21409247 (-) |
| LOC110493446 | LOC106589449 | coding | downstream | 65326 | 21377786 ~ 21385648 (-) |
| ntan1 | ntan1 | coding | downstream | 83596 | 21364150 ~ 21367378 (-) |
| LOC110493454 | NA | coding | upstream | 11798 | 21463000 ~ 21465098 (-) |
| mb | mb | coding | upstream | 40032 | 21491234 ~ 21494421 (-) |
| LOC110493463 | LOC106588978 | coding | upstream | 334964 | 21786166 ~ 21790195 (-) |
| trnaa-ugc-129 | NA | coding | upstream | 379688 | 21830890 ~ 21830965 (-) |
| LOC110493466 | LOC103354157 | coding | upstream | 399535 | 21850737 ~ 21851205 (-) |
| G1427889 | NA | non-coding | downstream | 6143 | 21444543 ~ 21444831 (-) |
| G1427883 | NA | non-coding | downstream | 21806 | 21428371 ~ 21429168 (-) |
| G1427880 | NA | non-coding | downstream | 26883 | 21423612 ~ 21424091 (-) |
| G1427879 | NA | non-coding | downstream | 27384 | 21422665 ~ 21423590 (-) |
| G1427871 | NA | non-coding | downstream | 50924 | 21399687 ~ 21400050 (-) |
| G1427896 | triobp | non-coding | upstream | 8169 | 21459371 ~ 21459944 (-) |
| G1427897 | LOC106564544 | non-coding | upstream | 8949 | 21460151 ~ 21460403 (-) |
| G1427902 | NA | non-coding | upstream | 14416 | 21465618 ~ 21466100 (-) |
| G1427901 | NA | non-coding | upstream | 19463 | 21470665 ~ 21471043 (-) |
| G1427703 | NA | other | downstream | 439654 | 21007541 ~ 21032030 (-) |
| LOC110511666 | LOC106589939 | other | downstream | 663389 | 20785995 ~ 20787989 (-) |
| G1427608 | NA | other | downstream | 676599 | 20772526 ~ 20774375 (-) |
| G1427470 | NA | other | downstream | 894082 | 20553196 ~ 20556892 (-) |
| G1428161 | LOC106564449 | other | upstream | 175475 | 21626677 ~ 21627280 (-) |
| G1428291 | LOC106588995 | other | upstream | 353129 | 21804331 ~ 21804660 (-) |
| G1428740 | NA | other | upstream | 888177 | 22339379 ~ 22340563 (-) |
| G1429642 | NA | other | upstream | 1803120 | 23254322 ~ 23254592 (-) |
| G1429643 | NA | other | upstream | 1803691 | 23254893 ~ 23255180 (-) |
