G1428165


Basic Information

Item Value
gene id G1428165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 21636891 ~ 21638651 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1635209
AAACTATTAAATTAAGGGAGTTATTGAGCTCTAAAGTGTCAAAATGTCCTTCAGTGTAACTGTCCGAGTTAAAATTCTAATGACAAAAGTGATTTTAAAATGTAGAAATTAATCGTAAAAATATAAATGAACACCCATAgcataattcaaatcaaatcaggtcacatacacatggttagcagatgttaatgcgagtgtagcaaaatgcttgtgcttctagttccgacagtgcagtaatatctaagtaAGTAAtataacaaattcacaacaactaccttatacacacaaatgtaaagggatggaatatgaatctgggccagcagccttgcgagggttaacacatttaaatgtcttacgtcagccacggagaaggagaggggggcccgcagtccttggtagcgggctgagttggtggcactgtattatcctcaaagcaggcaaaggtgtttagcttgtctggttttctttttgtagtctaaTTGCCTGctacatacgtctcgtgtctgggCCGTTGAACTGCGACTCCATTTTGTCCCTATACCGACATTTCGCTTGTTtaattgccttgtggagggaaaaAATAGACTGTttatattcggccatattccccgacctctttccatggttgaaTGCGGTGGTTTGTGCTTTAAGTTTTGCGTGattgctgccatctatccacggtttctggttggggtaggttttaatagtcacagtgcgtacaacatctccaatgcacttcctaatAAATTTGCTCACCGAGTCGGCATATAAATATATGTTATTGCCTGAGGCttcccggaacattttccagcccactcttgaagtgtggattccgattggtcagaccagcgttgaatggttctcgtcacCCTATTTGAGGTTCTGCCTATTGGACGGTACGAGCAAGATGGAGTCATAGttggatttgccgaagggaggacgggggagggccttgtatgcatcatggaagttagaatagcagtggtTCAGTGTTTTGCTCGAGCGGGTGCTAAAGTCAATGTGCTGGTAGAATTTAGATAGCattgttctcaaattagctttgttaaaatccccagctatatggtttccagtttacatagagtccagtgaagttctttcagggccttcgaggtatctgcttgggggggatatacacggctgtgactataatcgaagataattctcttgggagataatgcagtcggcatttgattgtaaggaattctagttcaggtgaacaaaaggacttgagttactgtatgttgttattgttacaccatgagtcgttaatcatgaggcatacatccccgcccttcttcttaccagagagatgtttgtttccgTTGGCGTGATGCATGAAGAAACCTGGTGGCTGTAtcgactctgacaacatatcccgagagccatgtttccgtgaaacagagaatgttaaaatctctgatgtctctctggaaggcaactcatGCCCTAATTCTGTCCACAttgttgtctagagactggacattggcgactaatatgctcggaagcggtgggtggtgtgctcgCCATTCTAAGTCTAACCAGGAGGCCGCTCCATCTGCCTCTCCTGTAGTGACAATGTTGTTTTGGGTTGGCCTCTGGGATTATATCCAATgggtggaggtccgaacaaaggatTTGCTTCGGGAAAGGCGTATTGCTGGTCGTCATGTTGGTAAATTGAcgtcgctcttatatccaatagttctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1635209 True 1729 lncRNA 0.44 2 21636891 21638651
Loading

Neighbor

gene id symbol gene type direction distance location
mb mb coding downstream 142470 21491234 ~ 21494421 (-)
LOC110493454 NA coding downstream 171793 21463000 ~ 21465098 (-)
LOC110493440 LOC106564549 coding downstream 197404 21429348 ~ 21439487 (-)
LOC110493441 sox10 coding downstream 219461 21411626 ~ 21417430 (-)
LOC110493443 NA coding downstream 227644 21407072 ~ 21409247 (-)
LOC110493463 LOC106588978 coding upstream 147515 21786166 ~ 21790195 (-)
trnaa-ugc-129 NA coding upstream 192239 21830890 ~ 21830965 (-)
LOC110493466 LOC103354157 coding upstream 212086 21850737 ~ 21851205 (-)
LOC110495103 LOC106598553 coding upstream 252030 21890681 ~ 21895100 (-)
LOC118940360 NA coding upstream 280983 21919634 ~ 21923538 (-)
G1427950 NA non-coding downstream 98019 21538666 ~ 21538872 (-)
G1427900 NA non-coding downstream 107416 21528898 ~ 21529475 (-)
G1427904 NA non-coding downstream 137004 21498755 ~ 21499887 (-)
G1427923 NA non-coding downstream 146858 21489810 ~ 21490033 (-)
G1427901 NA non-coding downstream 165848 21470665 ~ 21471043 (-)
G1428230 LOC106589277 non-coding upstream 124550 21763201 ~ 21768179 (-)
G1428285 LOC106588995 non-coding upstream 159290 21797941 ~ 21798486 (-)
G1428290 NA non-coding upstream 165356 21804007 ~ 21804208 (-)
G1428293 NA non-coding upstream 168433 21807084 ~ 21807422 (-)
G1428301 NA non-coding upstream 184056 21822707 ~ 21907883 (-)
G1428161 LOC106564449 other downstream 9611 21626677 ~ 21627280 (-)
G1427703 NA other downstream 625571 21007541 ~ 21032030 (-)
LOC110511666 LOC106589939 other downstream 849306 20785995 ~ 20787989 (-)
G1427608 NA other downstream 862516 20772526 ~ 20774375 (-)
G1428291 LOC106588995 other upstream 165680 21804331 ~ 21804660 (-)
G1428740 NA other upstream 700728 22339379 ~ 22340563 (-)
G1429642 NA other upstream 1615671 23254322 ~ 23254592 (-)
G1429643 NA other upstream 1616242 23254893 ~ 23255180 (-)
LOC110493468 cnnm2 other upstream 1713847 23233049 ~ 23353185 (-)

Expression

G1428165 Expression in all Baseline Samples

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G1428165 Expression in each Bioproject

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G1428165 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 40.
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Co-expression Network