G1428366



Basic Information


Item Value
gene id G1428366
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 21958316 ~ 21960112 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1635462
aggccacggaaggagtgttgtatggcattgaagctcgtttggaggttagttaacacagtttccaaagaagggtgagatgtatacagaatggtgttgtctgcgtagaggtggatcagggaatcacccgcagcaagagcgacatcgttgatatatacagagaaaagagtcggcccgagaattgaaccctgtggtacccccatagagactgccagaggtccggacaacaggccctccgatttgacacactgaactttgtctgagaaatagttggtgaaccaggcgaggcagtcatttgagaaaccaaggctgttgagtctgccgataagg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1635462 True 327 lncRNA 0.50 2 21958316 21960112

Neighbor


gene id symbol gene type direction distance location
LOC110511450 NA coding downstream 9520 21946015 ~ 21948796 (-)
LOC118940360 NA coding downstream 34778 21919634 ~ 21923538 (-)
LOC110495103 LOC106598553 coding downstream 63216 21890681 ~ 21895100 (-)
LOC110493466 LOC103354157 coding downstream 107111 21850737 ~ 21851205 (-)
trnaa-ugc-129 NA coding downstream 127351 21830890 ~ 21830965 (-)
LOC110493497 LOC106564611 coding upstream 64621 22024733 ~ 22048032 (-)
LOC110493498 LOC100380663 coding upstream 96768 22056880 ~ 22093664 (-)
LOC110493495 cp063 coding upstream 146271 22106383 ~ 22107823 (-)
LOC110493494 LOC106588920 coding upstream 148722 22108834 ~ 22140496 (-)
LOC110495107 xylt1 coding upstream 283981 22244093 ~ 22359648 (-)
G1428301 NA non-coding downstream 50433 21822707 ~ 21907883 (-)
G1428323 NA non-coding downstream 88233 21868594 ~ 21870083 (-)
G1428293 NA non-coding downstream 150894 21807084 ~ 21807422 (-)
G1428290 NA non-coding downstream 154108 21804007 ~ 21804208 (-)
G1428285 LOC106588995 non-coding downstream 159830 21797941 ~ 21798486 (-)
G1428564 LOC106588948 non-coding upstream 25989 21986101 ~ 21987434 (-)
G1428570 NA non-coding upstream 27958 21988070 ~ 21988784 (-)
G1428573 NA non-coding upstream 34348 21994460 ~ 21994703 (-)
G1428574 NA non-coding upstream 35030 21995142 ~ 21995846 (-)
G1428291 LOC106588995 other downstream 153656 21804331 ~ 21804660 (-)
G1428161 LOC106564449 other downstream 331036 21626677 ~ 21627280 (-)
LOC110493443 NA other downstream 549118 21407072 ~ 21409247 (-)
G1427703 NA other downstream 946996 21007541 ~ 21032030 (-)
LOC110511666 LOC106589939 other downstream 1170731 20785995 ~ 20787989 (-)
G1428740 NA other upstream 379267 22339379 ~ 22340563 (-)
G1429642 NA other upstream 1294210 23254322 ~ 23254592 (-)
G1429643 NA other upstream 1294781 23254893 ~ 23255180 (-)
LOC110493468 cnnm2 other upstream 1392386 23233049 ~ 23353185 (-)
LOC110495111 LOC106564590 other upstream 1444539 23403904 ~ 23410855 (-)

Expression



Co-expression Network