Gene
RNA
| Item | Value |
|---|---|
| gene id | G1429176 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 22758696 ~ 22759497 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: probable carboxypeptidase X1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1636358 | True | 286 | lncRNA | 0.52 | 2 | 22758696 | 22759497 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493485 | sec23b | coding | downstream | 164360 | 22576646 ~ 22594336 (-) |
| LOC110493486 | LOC106564601 | coding | downstream | 186417 | 22556054 ~ 22572279 (-) |
| LOC110493489 | LOC106564596 | coding | downstream | 238357 | 22507255 ~ 22520339 (-) |
| nomo | LOC106564596 | coding | downstream | 251608 | 22482938 ~ 22507088 (-) |
| LOC110495107 | xylt1 | coding | downstream | 399048 | 22244093 ~ 22359648 (-) |
| LOC110493477 | LOC106588590 | coding | upstream | 301968 | 23061465 ~ 23065730 (-) |
| LOC110493478 | LOC106588598 | coding | upstream | 306606 | 23066103 ~ 23074400 (-) |
| LOC110495105 | LOC106588599 | coding | upstream | 326785 | 23086282 ~ 23094793 (-) |
| LOC110493472 | LOC106588633 | coding | upstream | 342304 | 23101801 ~ 23123984 (-) |
| LOC118940679 | NA | coding | upstream | 346833 | 23106330 ~ 23106572 (-) |
| G1429089 | NA | non-coding | downstream | 57546 | 22700920 ~ 22701150 (-) |
| G1429086 | NA | non-coding | downstream | 60302 | 22698195 ~ 22698394 (-) |
| G1429060 | NA | non-coding | downstream | 61561 | 22633164 ~ 22697135 (-) |
| G1429075 | NA | non-coding | downstream | 86714 | 22671253 ~ 22671982 (-) |
| G1429061 | NA | non-coding | downstream | 123363 | 22634997 ~ 22635333 (-) |
| G1429182 | NA | non-coding | upstream | 9506 | 22769003 ~ 22771265 (-) |
| G1429201 | NA | non-coding | upstream | 45752 | 22805249 ~ 22806643 (-) |
| G1429203 | NA | non-coding | upstream | 50020 | 22809517 ~ 22809841 (-) |
| G1429208 | NA | non-coding | upstream | 68807 | 22828304 ~ 22829843 (-) |
| G1429217 | NA | non-coding | upstream | 80171 | 22839668 ~ 22839870 (-) |
| G1428740 | NA | other | downstream | 418133 | 22339379 ~ 22340563 (-) |
| G1428291 | LOC106588995 | other | downstream | 954036 | 21804331 ~ 21804660 (-) |
| G1428161 | LOC106564449 | other | downstream | 1131416 | 21626677 ~ 21627280 (-) |
| LOC110493443 | NA | other | downstream | 1349498 | 21407072 ~ 21409247 (-) |
| G1427703 | NA | other | downstream | 1747376 | 21007541 ~ 21032030 (-) |
| G1429642 | NA | other | upstream | 494825 | 23254322 ~ 23254592 (-) |
| G1429643 | NA | other | upstream | 495396 | 23254893 ~ 23255180 (-) |
| LOC110493468 | cnnm2 | other | upstream | 593001 | 23233049 ~ 23353185 (-) |
| LOC110495111 | LOC106564590 | other | upstream | 645154 | 23403904 ~ 23410855 (-) |
| LOC110493531 | NA | other | upstream | 1296642 | 24056129 ~ 24057311 (-) |
