Gene
RNA
| Item | Value |
|---|---|
| gene id | G1429790 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 23473962 ~ 23474183 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1637065 | True | 222 | lncRNA | 0.36 | 1 | 23473962 | 23474183 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493512 | dpcd | coding | upstream | 71164 | 23400228 ~ 23402798 (+) |
| LOC110493471 | LOC106588647 | coding | upstream | 252629 | 23189080 ~ 23221333 (+) |
| LOC110493475 | NA | coding | upstream | 348549 | 23124029 ~ 23125426 (+) |
| LOC110493474 | LOC106588617 | coding | upstream | 372208 | 23095456 ~ 23101754 (+) |
| LOC110493476 | LOC106564617 | coding | upstream | 388706 | 23081478 ~ 23085256 (+) |
| LOC110493514 | lbx1 | coding | downstream | 77446 | 23551629 ~ 23554314 (+) |
| LOC110493516 | LOC106588720 | coding | downstream | 91559 | 23565742 ~ 23571693 (+) |
| LOC110493515 | LOC100286439 | coding | downstream | 97781 | 23571964 ~ 23581274 (+) |
| rims1b | LOC106586590 | coding | downstream | 114035 | 23588218 ~ 23695383 (+) |
| LOC110493519 | LOC106564707 | coding | downstream | 227236 | 23701419 ~ 23866193 (+) |
| G1429777 | NA | non-coding | upstream | 24108 | 23449387 ~ 23449854 (+) |
| G1429752 | NA | non-coding | upstream | 55212 | 23418547 ~ 23418750 (+) |
| G1429707 | NA | non-coding | upstream | 98198 | 23372475 ~ 23375764 (+) |
| G1429705 | NA | non-coding | upstream | 103790 | 23367258 ~ 23370172 (+) |
| G1429700 | NA | non-coding | upstream | 109624 | 23364124 ~ 23364338 (+) |
| G1429792 | NA | non-coding | downstream | 4943 | 23479126 ~ 23479344 (+) |
| G1429795 | NA | non-coding | downstream | 12270 | 23486453 ~ 23486659 (+) |
| LOC110493513 | LOC106564616 | non-coding | downstream | 25035 | 23471769 ~ 23500002 (+) |
| G1429764 | NA | non-coding | downstream | 25918 | 23500101 ~ 23500311 (+) |
| G1429801 | NA | non-coding | downstream | 30336 | 23504519 ~ 23504757 (+) |
| G1429776 | NA | other | upstream | 26232 | 23447060 ~ 23447730 (+) |
| G1429775 | NA | other | upstream | 26985 | 23446548 ~ 23446977 (+) |
| LOC110495106 | LOC106564608 | other | upstream | 501106 | 22962952 ~ 22986459 (+) |
| G1428970 | LOC106564586 | other | upstream | 813271 | 22659808 ~ 22660691 (+) |
| G1432630 | NA | other | downstream | 2288783 | 25762966 ~ 25823263 (+) |
| LOC110493559 | LOC106587120 | other | downstream | 3209142 | 26683052 ~ 26685644 (+) |
| LOC110493575 | NA | other | downstream | 3845794 | 27313574 ~ 27333248 (+) |
| LOC118940374 | LOC106587354 | other | downstream | 4063012 | 27534233 ~ 27540054 (+) |
