Gene
RNA
| Item | Value |
|---|---|
| gene id | G1429968 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 23831131 ~ 23831904 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1637262 | True | 604 | lncRNA | 0.43 | 2 | 23831131 | 23831904 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rims1b | LOC106586590 | coding | upstream | 135748 | 23588218 ~ 23695383 (+) |
| LOC110493515 | LOC100286439 | coding | upstream | 249857 | 23571964 ~ 23581274 (+) |
| LOC110493516 | LOC106588720 | coding | upstream | 259438 | 23565742 ~ 23571693 (+) |
| LOC110493514 | lbx1 | coding | upstream | 276817 | 23551629 ~ 23554314 (+) |
| LOC110493513 | LOC106564616 | coding | upstream | 331745 | 23471769 ~ 23500002 (+) |
| LOC110493522 | LOC106564703 | coding | downstream | 52617 | 23884521 ~ 23899101 (+) |
| LOC110493525 | NA | coding | downstream | 67780 | 23899684 ~ 23901837 (+) |
| col17a1a | LOC106564695 | coding | downstream | 233435 | 24065339 ~ 24093254 (+) |
| stn1 | NA | coding | downstream | 296607 | 24128511 ~ 24133165 (+) |
| LOC110493536 | LOC106564693 | coding | downstream | 301719 | 24133623 ~ 24252905 (+) |
| G1429914 | NA | non-coding | upstream | 87134 | 23743742 ~ 23743997 (+) |
| G1429890 | NA | non-coding | upstream | 131569 | 23699328 ~ 23699562 (+) |
| G1429854 | NA | non-coding | upstream | 221413 | 23609166 ~ 23609718 (+) |
| G1429801 | NA | non-coding | upstream | 326374 | 23504519 ~ 23504757 (+) |
| G1429764 | NA | non-coding | upstream | 330820 | 23500101 ~ 23500311 (+) |
| G1429975 | NA | non-coding | downstream | 12921 | 23844825 ~ 23845138 (+) |
| G1429978 | NA | non-coding | downstream | 22383 | 23854287 ~ 23854628 (+) |
| G1429979 | NA | non-coding | downstream | 23192 | 23855096 ~ 23855299 (+) |
| G1429894 | NA | non-coding | downstream | 34439 | 23866343 ~ 23868129 (+) |
| G1429994 | NA | non-coding | downstream | 48744 | 23880648 ~ 23880938 (+) |
| G1429776 | NA | other | upstream | 383401 | 23447060 ~ 23447730 (+) |
| G1429775 | NA | other | upstream | 384154 | 23446548 ~ 23446977 (+) |
| LOC110493474 | LOC106588617 | other | upstream | 729379 | 23095456 ~ 23101754 (+) |
| LOC110495106 | LOC106564608 | other | upstream | 858275 | 22962952 ~ 22986459 (+) |
| G1428970 | LOC106564586 | other | upstream | 1170440 | 22659808 ~ 22660691 (+) |
| LOC110493519 | LOC106564707 | other | downstream | 31121 | 23701419 ~ 23866193 (+) |
| G1432630 | NA | other | downstream | 1931062 | 25762966 ~ 25823263 (+) |
| LOC110493559 | LOC106587120 | other | downstream | 2851421 | 26683052 ~ 26685644 (+) |
| LOC110493575 | NA | other | downstream | 3488073 | 27313574 ~ 27333248 (+) |
| LOC118940374 | LOC106587354 | other | downstream | 3705291 | 27534233 ~ 27540054 (+) |
