Gene
RNA
| Item | Value |
|---|---|
| gene id | G1429894 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 23866343 ~ 23868129 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1637186 | False | 1708 | lncRNA | 0.38 | 1 | 23866343 | 23868050 |
| TU1637185 | True | 1670 | lncRNA | 0.38 | 1 | 23866460 | 23868129 |
23,862,000
23,862,400
23,862,800
23,863,200
23,863,600
23,864,000
23,864,400
23,864,800
23,865,200
23,865,600
23,865,600
23,866,000
23,866,400
23,866,800
23,867,200
23,867,600
23,868,000
23,868,400
23,868,800
23,869,200
NC_048581.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493519 | LOC106564707 | coding | upstream | 150 | 23701419 ~ 23866193 (+) |
| rims1b | LOC106586590 | coding | upstream | 170960 | 23588218 ~ 23695383 (+) |
| LOC110493515 | LOC100286439 | coding | upstream | 285069 | 23571964 ~ 23581274 (+) |
| LOC110493516 | LOC106588720 | coding | upstream | 294650 | 23565742 ~ 23571693 (+) |
| LOC110493514 | lbx1 | coding | upstream | 312029 | 23551629 ~ 23554314 (+) |
| LOC110493522 | LOC106564703 | coding | downstream | 16392 | 23884521 ~ 23899101 (+) |
| LOC110493525 | NA | coding | downstream | 31555 | 23899684 ~ 23901837 (+) |
| col17a1a | LOC106564695 | coding | downstream | 197210 | 24065339 ~ 24093254 (+) |
| stn1 | NA | coding | downstream | 260382 | 24128511 ~ 24133165 (+) |
| LOC110493536 | LOC106564693 | coding | downstream | 265494 | 24133623 ~ 24252905 (+) |
| G1429979 | NA | non-coding | upstream | 11044 | 23855096 ~ 23855299 (+) |
| G1429978 | NA | non-coding | upstream | 11715 | 23854287 ~ 23854628 (+) |
| G1429975 | NA | non-coding | upstream | 21205 | 23844825 ~ 23845138 (+) |
| G1429968 | NA | non-coding | upstream | 34439 | 23831131 ~ 23831904 (+) |
| G1429914 | NA | non-coding | upstream | 122346 | 23743742 ~ 23743997 (+) |
| G1429994 | NA | non-coding | downstream | 12519 | 23880648 ~ 23880938 (+) |
| G1429989 | NA | non-coding | downstream | 15375 | 23883504 ~ 23884457 (+) |
| G1429991 | NA | non-coding | downstream | 36072 | 23904201 ~ 23904547 (+) |
| G1429985 | LOC106586723 | non-coding | downstream | 39704 | 23907833 ~ 23910851 (+) |
| G1430003 | NA | non-coding | downstream | 58467 | 23926596 ~ 23926895 (+) |
| G1429776 | NA | other | upstream | 418613 | 23447060 ~ 23447730 (+) |
| G1429775 | NA | other | upstream | 419366 | 23446548 ~ 23446977 (+) |
| LOC110493474 | LOC106588617 | other | upstream | 764591 | 23095456 ~ 23101754 (+) |
| LOC110495106 | LOC106564608 | other | upstream | 893487 | 22962952 ~ 22986459 (+) |
| G1432630 | NA | other | downstream | 1894837 | 25762966 ~ 25823263 (+) |
| LOC110493559 | LOC106587120 | other | downstream | 2815196 | 26683052 ~ 26685644 (+) |
| LOC110493575 | NA | other | downstream | 3451848 | 27313574 ~ 27333248 (+) |
| LOC118940374 | LOC106587354 | other | downstream | 3669066 | 27534233 ~ 27540054 (+) |
| LOC110493581 | LOC106564710 | other | downstream | 3675058 | 27543187 ~ 27547668 (+) |
