Gene
RNA
| Item | Value |
|---|---|
| gene id | G1429991 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 23904201 ~ 23904547 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1637288 | True | 310 | lncRNA | 0.43 | 2 | 23904201 | 23904547 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493525 | NA | coding | upstream | 2364 | 23899684 ~ 23901837 (+) |
| LOC110493522 | LOC106564703 | coding | upstream | 5100 | 23884521 ~ 23899101 (+) |
| LOC110493519 | LOC106564707 | coding | upstream | 38008 | 23701419 ~ 23866193 (+) |
| rims1b | LOC106586590 | coding | upstream | 208818 | 23588218 ~ 23695383 (+) |
| LOC110493515 | LOC100286439 | coding | upstream | 322927 | 23571964 ~ 23581274 (+) |
| col17a1a | LOC106564695 | coding | downstream | 160792 | 24065339 ~ 24093254 (+) |
| stn1 | NA | coding | downstream | 223964 | 24128511 ~ 24133165 (+) |
| LOC110493536 | LOC106564693 | coding | downstream | 229076 | 24133623 ~ 24252905 (+) |
| LOC118940090 | NA | coding | downstream | 429788 | 24334335 ~ 24353546 (+) |
| LOC110493539 | LOC106564691 | coding | downstream | 569163 | 24473710 ~ 24694431 (+) |
| G1429989 | NA | non-coding | upstream | 19744 | 23883504 ~ 23884457 (+) |
| G1429994 | NA | non-coding | upstream | 23263 | 23880648 ~ 23880938 (+) |
| G1429894 | NA | non-coding | upstream | 36072 | 23866343 ~ 23868129 (+) |
| G1429979 | NA | non-coding | upstream | 48902 | 23855096 ~ 23855299 (+) |
| G1429978 | NA | non-coding | upstream | 49573 | 23854287 ~ 23854628 (+) |
| G1429985 | LOC106586723 | non-coding | downstream | 3286 | 23907833 ~ 23910851 (+) |
| G1430003 | NA | non-coding | downstream | 22049 | 23926596 ~ 23926895 (+) |
| G1430005 | NA | non-coding | downstream | 24562 | 23929109 ~ 23929309 (+) |
| G1430018 | NA | non-coding | downstream | 40001 | 23944548 ~ 23944872 (+) |
| G1430031 | NA | non-coding | downstream | 55313 | 23959860 ~ 24091435 (+) |
| G1429776 | NA | other | upstream | 456471 | 23447060 ~ 23447730 (+) |
| G1429775 | NA | other | upstream | 457224 | 23446548 ~ 23446977 (+) |
| LOC110493474 | LOC106588617 | other | upstream | 802449 | 23095456 ~ 23101754 (+) |
| LOC110495106 | LOC106564608 | other | upstream | 931345 | 22962952 ~ 22986459 (+) |
| G1432630 | NA | other | downstream | 1858419 | 25762966 ~ 25823263 (+) |
| LOC110493559 | LOC106587120 | other | downstream | 2778778 | 26683052 ~ 26685644 (+) |
| LOC110493575 | NA | other | downstream | 3415430 | 27313574 ~ 27333248 (+) |
| LOC118940374 | LOC106587354 | other | downstream | 3632648 | 27534233 ~ 27540054 (+) |
| LOC110493581 | LOC106564710 | other | downstream | 3638640 | 27543187 ~ 27547668 (+) |
