G1433900


Basic Information

Item Value
gene id G1433900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 27254885 ~ 27258392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1641581
acaagttctcatttacaactgcgacccggccaagataaagcaaagcagtgcgacaaaaacaacagagttacacataaacaaacgtacagtcaataacacagtagaacaataacacagtgtgtgcaaatgtagaagagtagggaggtaaggcaagaaataggccatagaggtgaaataattacaatttagcattaacactggagtgatagatgtgcagatgatgatgtgcaagtagagatacagggGTACAAtagagcaagaagataaataatatggggatgaggtagtagtGTGTGCTCTTTACAGATTggttgtgtacaggtacagtgattggtaaactgctctgacagctgatgcttaaagttagagagggagatataagactccatccagcatcagtgatttttgcaatttgttccaatcattggcagcagagaattggaaggaaaggcggtcaaaggaagtgttggctttggggatgacccgtgcaatatacctgctggagcgcgtgctacgggtgggtgttgctatggtgaccattgagctgagataagtggggctttacctagcaaagacttatagatgacctggaaccagtgggtttggcgatgaatatgtagagggccagccaacgagagcatacaggtcgtagtggtgggtagtatatggggctttggtgacaaaacagatggcactgtgatagactgtatccaatttgctgagtagagtgttggaggctattttgtaaatgacatcgccgaagtcaaggatcggtaggatagtccgttttatgagggtatgtttggcagcatgagtgaaggaggctttgtttgcgaaataggaagctgattctagattgcTTAGATAAAGGCAAACCATGCATTGATATGACAAACAAGTAATGTGTCATTTATAACAACAGGGGCCTCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1641581 True 931 lncRNA 0.43 2 27254885 27258392
Loading

Neighbor

gene id symbol gene type direction distance location
tnrc6c2 LOC106564661 coding upstream 105585 27054451 ~ 27149300 (+)
LOC110495152 NA coding upstream 305840 26929368 ~ 26949045 (+)
sept9b LOC106564665 coding upstream 326607 26844294 ~ 26928896 (+)
LOC110493562 LOC106595010 coding upstream 439183 26812439 ~ 26815702 (+)
LOC110493561 LOC106564667 coding upstream 454875 26758441 ~ 26800010 (+)
tefm LOC106564655 coding downstream 14590 27272982 ~ 27276208 (+)
utp6 LOC106564653 coding downstream 37477 27295869 ~ 27308012 (+)
LOC110493575 NA coding downstream 55772 27313574 ~ 27333248 (+)
LOC118940369 NA coding downstream 166060 27424452 ~ 27426672 (+)
LOC110515386 LOC106564710 coding downstream 235228 27493620 ~ 27496323 (+)
G1433855 NA non-coding upstream 23481 27175512 ~ 27231404 (+)
G1433846 NA non-coding upstream 95645 27155584 ~ 27159240 (+)
G1433838 NA non-coding upstream 141332 27110741 ~ 27113553 (+)
G1433835 NA non-coding upstream 146145 27106699 ~ 27108740 (+)
G1433780 NA non-coding upstream 188034 27003338 ~ 27066851 (+)
G1433902 NA non-coding downstream 2907 27261299 ~ 27261857 (+)
G1433906 LOC106564656 non-coding downstream 6591 27264983 ~ 27287348 (+)
G1433904 NA non-coding downstream 31980 27290372 ~ 27292130 (+)
G1433945 NA non-coding downstream 121313 27379705 ~ 27380286 (+)
LOC110493559 LOC106587120 other upstream 569244 26683052 ~ 26685644 (+)
G1432630 NA other upstream 1431622 25762966 ~ 25823263 (+)
LOC110493519 LOC106564707 other upstream 3389487 23701419 ~ 23866193 (+)
G1429776 NA other upstream 3807155 23447060 ~ 23447730 (+)
G1429775 NA other upstream 3807908 23446548 ~ 23446977 (+)
LOC118940374 LOC106587354 other downstream 278803 27534233 ~ 27540054 (+)
LOC110493581 LOC106564710 other downstream 284795 27543187 ~ 27547668 (+)
LOC118940376 LOC106564710 other downstream 295324 27549527 ~ 27555427 (+)
LOC110493582 LOC106564710 other downstream 340105 27595643 ~ 27602283 (+)

Expression

G1433900 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
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G1433900 Expression in each Bioproject

Bar chart with 20 bars.
G1433900 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network