G1433902


Basic Information

Item Value
gene id G1433902
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 27261299 ~ 27261857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1641583
ggtcagtcaatctggaaaacttcaataactttgaaagtttcttcaagtgcagtcacaaaaaccatgaagtgctatgatgaaactggctttcatgaggactgccacatgaaaggaagacccagagttacctctgctggagaGGTTAAGTTCATTAtaataactgcacctcagattgcagcccaaataaatgattcacagagttcaagtaacagacacatttcaacatcaactgttcataggaaactgagtgaatcaggccttcatggtcgaattgagtgctgcgtcagatgacctggcctccacaatcacctgatctctacccagttgagatggtttgggatgagttggaccgcagcatgaaggaaaagcagctaacaagtgctcagcatatgtgggaactccttcaagactgttggaaaagcattcctggtgaagctggttgagagaatgccaagactgtgcaaagctgtcatcaaggcaaagggtggctactttgaatctaaattataaaatatatttagatttgtttaacactattttggttactatgtgatgtgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1641583 True 559 lncRNA 0.42 1 27261299 27261857
Loading

Neighbor

gene id symbol gene type direction distance location
tnrc6c2 LOC106564661 coding upstream 111999 27054451 ~ 27149300 (+)
LOC110495152 NA coding upstream 312254 26929368 ~ 26949045 (+)
sept9b LOC106564665 coding upstream 333021 26844294 ~ 26928896 (+)
LOC110493562 LOC106595010 coding upstream 445597 26812439 ~ 26815702 (+)
LOC110493561 LOC106564667 coding upstream 461289 26758441 ~ 26800010 (+)
tefm LOC106564655 coding downstream 11125 27272982 ~ 27276208 (+)
utp6 LOC106564653 coding downstream 34012 27295869 ~ 27308012 (+)
LOC110493575 NA coding downstream 52307 27313574 ~ 27333248 (+)
LOC118940369 NA coding downstream 162595 27424452 ~ 27426672 (+)
LOC110515386 LOC106564710 coding downstream 231763 27493620 ~ 27496323 (+)
G1433900 NA non-coding upstream 2907 27254885 ~ 27258392 (+)
G1433855 NA non-coding upstream 29895 27175512 ~ 27231404 (+)
G1433846 NA non-coding upstream 102059 27155584 ~ 27159240 (+)
G1433838 NA non-coding upstream 147746 27110741 ~ 27113553 (+)
G1433835 NA non-coding upstream 152559 27106699 ~ 27108740 (+)
G1433906 LOC106564656 non-coding downstream 3126 27264983 ~ 27287348 (+)
G1433904 NA non-coding downstream 28515 27290372 ~ 27292130 (+)
G1433945 NA non-coding downstream 117848 27379705 ~ 27380286 (+)
G1433955 NA non-coding downstream 136796 27398653 ~ 27460368 (+)
LOC110493559 LOC106587120 other upstream 575658 26683052 ~ 26685644 (+)
G1432630 NA other upstream 1438036 25762966 ~ 25823263 (+)
LOC110493519 LOC106564707 other upstream 3395901 23701419 ~ 23866193 (+)
G1429776 NA other upstream 3813569 23447060 ~ 23447730 (+)
G1429775 NA other upstream 3814322 23446548 ~ 23446977 (+)
LOC118940374 LOC106587354 other downstream 275338 27534233 ~ 27540054 (+)
LOC110493581 LOC106564710 other downstream 281330 27543187 ~ 27547668 (+)
LOC118940376 LOC106564710 other downstream 291859 27549527 ~ 27555427 (+)
LOC110493582 LOC106564710 other downstream 336640 27595643 ~ 27602283 (+)

Expression

G1433902 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G1433902 Expression in each Bioproject

Bar chart with 19 bars.
G1433902 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network