Gene
RNA
| Item | Value |
|---|---|
| gene id | G1433945 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 27379705 ~ 27380286 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| rab11 family-interacting protein 4A-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1641633 | True | 353 | lncRNA | 0.47 | 2 | 27379705 | 27380286 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493575 | NA | coding | upstream | 46457 | 27313574 ~ 27333248 (+) |
| utp6 | LOC106564653 | coding | upstream | 71693 | 27295869 ~ 27308012 (+) |
| tefm | LOC106564655 | coding | upstream | 103497 | 27272982 ~ 27276208 (+) |
| tnrc6c2 | LOC106564661 | coding | upstream | 230405 | 27054451 ~ 27149300 (+) |
| LOC110495152 | NA | coding | upstream | 430660 | 26929368 ~ 26949045 (+) |
| LOC118940369 | NA | coding | downstream | 44166 | 27424452 ~ 27426672 (+) |
| LOC110515386 | LOC106564710 | coding | downstream | 113334 | 27493620 ~ 27496323 (+) |
| LOC118940370 | LOC106564710 | coding | downstream | 116148 | 27496434 ~ 27505085 (+) |
| LOC118940372 | LOC106564710 | coding | downstream | 126036 | 27506322 ~ 27513332 (+) |
| LOC118940371 | LOC106564710 | coding | downstream | 133056 | 27513342 ~ 27519163 (+) |
| G1433904 | NA | non-coding | upstream | 87575 | 27290372 ~ 27292130 (+) |
| G1433906 | LOC106564656 | non-coding | upstream | 92357 | 27264983 ~ 27287348 (+) |
| G1433902 | NA | non-coding | upstream | 117848 | 27261299 ~ 27261857 (+) |
| G1433900 | NA | non-coding | upstream | 121313 | 27254885 ~ 27258392 (+) |
| G1433955 | NA | non-coding | downstream | 18367 | 27398653 ~ 27460368 (+) |
| G1433988 | NA | non-coding | downstream | 65955 | 27446241 ~ 27451970 (+) |
| G1434451 | NA | non-coding | downstream | 109474 | 27489760 ~ 27490153 (+) |
| G1434457 | NA | non-coding | downstream | 115781 | 27496067 ~ 27504039 (+) |
| LOC110493559 | LOC106587120 | other | upstream | 694064 | 26683052 ~ 26685644 (+) |
| G1432630 | NA | other | upstream | 1556442 | 25762966 ~ 25823263 (+) |
| LOC110493519 | LOC106564707 | other | upstream | 3514307 | 23701419 ~ 23866193 (+) |
| G1429776 | NA | other | upstream | 3931975 | 23447060 ~ 23447730 (+) |
| LOC118940374 | LOC106587354 | other | downstream | 156909 | 27534233 ~ 27540054 (+) |
| LOC110493581 | LOC106564710 | other | downstream | 162901 | 27543187 ~ 27547668 (+) |
| LOC118940376 | LOC106564710 | other | downstream | 173430 | 27549527 ~ 27555427 (+) |
| LOC110493582 | LOC106564710 | other | downstream | 218211 | 27595643 ~ 27602283 (+) |
| G1434530 | NA | other | downstream | 338171 | 27718457 ~ 27718847 (+) |
