G1435388 (LOC106564959)


Basic Information

Item Value
gene id G1435388
gene name LOC106564959
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 28481275 ~ 28495682 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1643367
TGATGATTCATGTCAAAAGTAACCATGGCCGATACTAAGGTAAATTTCAAATGAACATTGTTTTTAAAGTGAAATGTTGAGGGAGACATCCAATTCCATCCTGCCTTACCCGCTAGCCTCTCCGTCCAGCAGCCTCCTGTACTCAGCGATCTCCATCTCCAGGCGTGTCTTGATATCCAGCAGCATCTTGTACTCCTGGCCCTGGCGTTCCATGTCGCTGCGGAGAGAAACTAGCTGCTCCTCCAGACTGGTCACTTGGTTCTGGAGGCGTCCCAGCTGCATGGAGTAACGGCCTTCAGTCTCCGCCAGCGTGTTCTCCAGGGAGCCTTTCTATTGGCCGGGAGAGATTTGAGATGATGGGTGAAAAACTGTGGGAGTAGGTTTGGAATTTGGAATGTTTACTGTCATACTGAAAAAGTTATCTCTAGTAATTGAATGTGTAGTCAGGTTGGCTATAGTAATGTAGAGGTGCTTGGCTATAACATCTTGAGGGATAGTGGAAGAGTCCAGGTGAAAGTGAGATACTTGAGATTTGGTAAACAGAATGATGAAAGAGTCAAATGCTGATTATTTAAGAAAGTTGTGTAAGTAATGTGCCCTAAACTGTGGTCTGTGTAAATAATTACAGCTCACCATGCTGAGCTGTGACTGCAGTTCAAtctccaggccctgcagtgtgcGACGGATCTCCGAAATCTCTGACTTGGAGGTCTGGAGAACCTCTGTGCTGGACGCCACCTCCTTGTTCAACGTCTCTGTCTtggTCTGGAGAACCTCTGTGCTGGACGCCACCTCCTTGTTCAACGTCTCTGTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1643367 True 815 lncRNA 0.47 2 28481275 28495682

Neighbor

gene id symbol gene type direction distance location
LOC110493625 LOC106569433 coding downstream 84040 28394623 ~ 28397235 (-)
LOC118936556 LOC106569433 coding downstream 91542 28387136 ~ 28389733 (-)
LOC110495156 LOC106564766 coding downstream 112255 28366452 ~ 28369020 (-)
LOC110493621 LOC106564766 coding downstream 152401 28328130 ~ 28328877 (-)
LOC110495126 LOC106564751 coding downstream 194477 28255049 ~ 28286798 (-)
LOC110495129 NA coding upstream 1103 28496785 ~ 28521285 (-)
LOC110493627 LOC106564957 coding upstream 59872 28555554 ~ 28560692 (-)
LOC110493630 LOC106564955 coding upstream 114703 28610385 ~ 28622231 (-)
LOC101268960 LOC106564996 coding upstream 128558 28624240 ~ 28626947 (-)
LOC110493634 LOC106564954 coding upstream 141330 28637012 ~ 28645555 (-)
G1435383 NA non-coding downstream 14537 28456493 ~ 28466738 (-)
G1435390 NA non-coding downstream 18567 28454804 ~ 28462708 (-)
G1435370 NA non-coding downstream 63204 28382820 ~ 28418071 (-)
G1435433 NA non-coding upstream 8015 28503697 ~ 28504230 (-)
G1435434 NA non-coding upstream 8622 28504304 ~ 28504823 (-)
G1435445 NA non-coding upstream 22017 28517699 ~ 28517973 (-)
G1435385 NA non-coding upstream 27058 28522740 ~ 28527066 (-)
G1435199 LOC106587683 other downstream 280593 28189019 ~ 28200682 (-)
G1435257 NA other downstream 298714 28181042 ~ 28182561 (-)
LOC110495123 LOC106587585 other downstream 433274 28043251 ~ 28048026 (-)
G1435467 NA other upstream 51591 28547273 ~ 28547556 (-)
G1436694 NA other upstream 1116570 29612252 ~ 29612608 (-)
LOC110495137 LOC106564911 other upstream 1442644 29926378 ~ 29979179 (-)
G1437411 NA other upstream 1554920 30050602 ~ 30114123 (-)
G1437507 NA other upstream 1745768 30241450 ~ 30243706 (-)

Expression


Co-expression Network