Gene
RNA
| Item | Value |
|---|---|
| gene id | G1435935 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 28708473 ~ 28709421 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1643981 | True | 252 | lncRNA | 0.36 | 2 | 28708473 | 28709421 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493635 | LOC100194498 | coding | downstream | 37553 | 28651004 ~ 28670920 (-) |
| LOC110493634 | LOC106564954 | coding | downstream | 62918 | 28637012 ~ 28645555 (-) |
| LOC101268960 | LOC106564996 | coding | downstream | 81526 | 28624240 ~ 28626947 (-) |
| LOC110493630 | LOC106564955 | coding | downstream | 86242 | 28610385 ~ 28622231 (-) |
| LOC110493627 | LOC106564957 | coding | downstream | 147781 | 28555554 ~ 28560692 (-) |
| LOC110493637 | LOC106564949 | coding | upstream | 33404 | 28742825 ~ 28748702 (-) |
| LOC110493640 | LOC106564948 | coding | upstream | 52359 | 28761780 ~ 28763712 (-) |
| LOC110493641 | ccd49 | coding | upstream | 54720 | 28764141 ~ 28768448 (-) |
| LOC110493642 | LOC106564946 | coding | upstream | 60874 | 28770295 ~ 28784724 (-) |
| LOC110493650 | LOC106564939 | coding | upstream | 136460 | 28845881 ~ 28848504 (-) |
| G1435905 | LOC106564952 | non-coding | downstream | 19987 | 28674474 ~ 28688486 (-) |
| G1435869 | NA | non-coding | downstream | 129788 | 28578453 ~ 28578685 (-) |
| G1435867 | NA | non-coding | downstream | 133254 | 28573837 ~ 28575219 (-) |
| G1435865 | NA | non-coding | downstream | 136667 | 28571481 ~ 28571806 (-) |
| G1435458 | NA | non-coding | downstream | 167690 | 28540564 ~ 28540783 (-) |
| LOC110493648 | LOC106564936 | non-coding | upstream | 150541 | 28859182 ~ 28886611 (-) |
| G1436041 | NA | non-coding | upstream | 218343 | 28927764 ~ 28928014 (-) |
| vig-2 | NA | non-coding | upstream | 227276 | 28936671 ~ 28939970 (-) |
| G1436056 | NA | non-coding | upstream | 247918 | 28957339 ~ 28957786 (-) |
| G1436104 | NA | non-coding | upstream | 349948 | 29059369 ~ 29059568 (-) |
| G1435467 | NA | other | downstream | 160917 | 28547273 ~ 28547556 (-) |
| LOC110495156 | LOC106564766 | other | downstream | 341232 | 28366452 ~ 28369020 (-) |
| LOC110493621 | LOC106564766 | other | downstream | 379596 | 28328130 ~ 28328877 (-) |
| G1435199 | LOC106587683 | other | downstream | 507791 | 28189019 ~ 28200682 (-) |
| G1435257 | NA | other | downstream | 525912 | 28181042 ~ 28182561 (-) |
| G1436694 | NA | other | upstream | 902831 | 29612252 ~ 29612608 (-) |
| LOC110495137 | LOC106564911 | other | upstream | 1228905 | 29926378 ~ 29979179 (-) |
| G1437411 | NA | other | upstream | 1341181 | 30050602 ~ 30114123 (-) |
| G1437507 | NA | other | upstream | 1532029 | 30241450 ~ 30243706 (-) |
| G1437609 | NA | other | upstream | 1757902 | 30467323 ~ 30468772 (-) |
