G1437244


Basic Information

Item Value
gene id G1437244
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 29757726 ~ 29759718 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1645409
GATGACAGTGTCTTTATTTGAATATCTTATAGTTTTATTGCATGTGGAACATGGAATTCGGGTAGCTACCAAATCTATATCGGACAGTTGAGAATGAAAACACAGACAGCTCTTAATATACATTCATAGCATCCGTTACTTAATGGGATTGGATGATGATTAGTGTtattttactgtacatttttaaatCCGGTGGACTGTCAAATGTTAACCACATGCAGGAACCTCTGACACCTTTAGCATGCAGTGTTAATGTCTATATGAGAATCACACTGATAGCTGACATGTGAAATCAGTCTAAAGTACATGTTTTCACTCAACTGCTTACCCTGTTCACATTATATGAACCATCCGCCACATAGATATAGAGTTGTGGCCAAACCTACAGACCAGGAGGCGTGTTCATTATGCAGATCCTGTTGCAAATCTTTCTTGAACAGAAGCAAACAGAACGAAACGGGGACAGAACTACCTGAGTTTCTCCAATAGAAACGTTGGTTGTTTGGACTGATGATTATTACCGAGTACACATTGCATCTCTCATGAGGAACTATTAGGTTCCTCAGTGacaataaagtgtgtgtgtgtgtgtgtgtgttgacaggaCATTGACAGAACTTTCCCAGTACAGCATGACCCTAATATTCCAGTCTTGACAGAGGGCATTTTTAACCTGTCTCACTAAAAGCACAGCCAGACCCCGTCTAGCGTTGACTTGAACTGGACCATTTGAGCAAAGCGGGCAGTCTTGAAAAGCCTCCCAAAAACCTTGTTTAAATGGATGAAGAAGTGTTTTGCCCCAAAGGTTATGAGAAACAATGCACTTAGCCCACGAGGGTGAGATGGGTCACTGTGTGTAGATAACCTTTGGACCCCATACTAATGGCGTGTTCAAGGACATTTTCAACATGCTAACCGGATGATCAGGCACTTGTATAAATACAACCCGTTAGCAAtctgacattttttttgtttcctagttccgactagcacatGAACGTGGCACAGGGGCCAGAGGAGATATGGGGAGAGGTTCTTATTTAGGGGTATATCCCAAAGCATCTATTTCCCTTCTTACAGTAAACTCATATTTAGTCTGTGTATTTTGATCACTCATACTGAATGTGAAGCTGGCCACAATTGCTGCAGCATAGActccagcagagagcagcattTGGCAACAAGAGACAGATTCAACACAGCGATCCAGTTTGCCCACTGGTAGTCCCTGTATTTCTTTGTCCAGTTGAAGTAATTGATTATAAAATATTTTACATTCTATATCTACTAAACACCTATTGTTTTAGATCCAAGATGCAAACGAGGTCATTTATTGTATGtatactgtgtacaaaacatcaggaacagCTTCCTACTATTGAGTGGCactccctttttgccctcagaacagactcaattcatcagggcatggactcaacaaggtgtcaaaagcattccaccgtcgtgtcaagttggctggatgtcctttgggttggtggaccattcttgatacacacgggaaacttgGGCGTGAAAAcccccagcagcgttgcatttCTAGatacaaaccggtgtgcctggcacctactaccataccctgttcaaaagcaccTAAATGTTGTGTCTTGCCCGGTCCCCCTCTGAAGGGCACACATACACCACCCACGTGTCAAAGCTTCAAAAccctttaacccgtctcctccccttcatctacacggattgaagtggatgtaACAAGGGACATCGATAAGTGTGTACAGCTTTCACCTGTTCAGTCCAtggcatggaaagagcagatgttcctaatgtttagtacacCCAGTGTATATTGAACACTTGCTGACTAGGGACACCTAAAACGGCACAATTACCAGACTACTAAAAGTTCCTGTTAATGAGGGGGAACACCTCAATTAGTATAAGATATTAGTATAAGTAGTATAAGATATATTTGTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1645409 True 1957 lncRNA 0.42 2 29757726 29759718

Neighbor

gene id symbol gene type direction distance location
LOC110495135 LOC106564922 coding downstream 74568 29524398 ~ 29683158 (-)
LOC110493664 NA coding downstream 320326 29435134 ~ 29437400 (-)
LOC118940393 NA coding downstream 324841 29423991 ~ 29432885 (-)
LOC110493663 LOC106564923 coding downstream 335398 29368440 ~ 29422328 (-)
LOC110495134 LOC106588153 coding downstream 393713 29336006 ~ 29364013 (-)
LOC110493666 kpra coding upstream 64321 29824039 ~ 29849081 (-)
si:dkey-45d16.4 LOC106588570 coding upstream 89543 29849261 ~ 29852422 (-)
LOC110495137 LOC106564911 coding upstream 171203 29926378 ~ 29979179 (-)
LOC110493672 LOC106564910 coding upstream 228573 29988291 ~ 30027542 (-)
acox1 LOC100380782 coding upstream 268263 30027981 ~ 30057047 (-)
G1436756 LOC106569275 non-coding downstream 41632 29715867 ~ 29716094 (-)
G1436753 NA non-coding downstream 43988 29713498 ~ 29713738 (-)
G1436752 NA non-coding downstream 44826 29712689 ~ 29712900 (-)
G1436749 NA non-coding downstream 47557 29705753 ~ 29710169 (-)
G1436747 NA non-coding downstream 55208 29702245 ~ 29702518 (-)
G1437275 NA non-coding upstream 41509 29801227 ~ 29801695 (-)
G1437276 NA non-coding upstream 43031 29802749 ~ 29802960 (-)
G1437281 NA non-coding upstream 49600 29809318 ~ 29809519 (-)
G1437284 NA non-coding upstream 51633 29811351 ~ 29811667 (-)
G1437292 NA non-coding upstream 62526 29822244 ~ 29822828 (-)
G1436694 NA other downstream 145118 29612252 ~ 29612608 (-)
G1435467 NA other downstream 1210170 28547273 ~ 28547556 (-)
LOC110495156 LOC106564766 other downstream 1390485 28366452 ~ 28369020 (-)
LOC110493621 LOC106564766 other downstream 1428849 28328130 ~ 28328877 (-)
G1435199 LOC106587683 other downstream 1557044 28189019 ~ 28200682 (-)
G1437411 NA other upstream 290884 30050602 ~ 30114123 (-)
G1437507 NA other upstream 481732 30241450 ~ 30243706 (-)
G1437609 NA other upstream 707605 30467323 ~ 30468772 (-)
LOC110493700 LOC106564887 other upstream 972471 30731077 ~ 30781553 (-)

Expression


Co-expression Network