Gene
RNA
| Item | Value |
|---|---|
| gene id | G1436967 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 30033900 ~ 30038063 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| peroxisomal acyl-coenzyme A oxidase 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1645101 | True | 1608 | TUCP | 0.44 | 2 | 30033900 | 30038063 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493671 | LOC106564913 | coding | upstream | 107751 | 29900808 ~ 29926149 (+) |
| LOC118940394 | NA | coding | upstream | 153621 | 29871991 ~ 29880729 (+) |
| cygb2 | LOC106564914 | coding | upstream | 165842 | 29858637 ~ 29868058 (+) |
| LOC110493668 | LOC105021619 | coding | upstream | 213157 | 29818939 ~ 29820743 (+) |
| LOC110495157 | LOC106564973 | coding | upstream | 238474 | 29793566 ~ 29795426 (+) |
| LOC110495138 | NA | coding | downstream | 18990 | 30048246 ~ 30058516 (+) |
| LOC110493676 | LOC106564902 | coding | downstream | 84902 | 30122965 ~ 30140014 (+) |
| LOC110493681 | LOC106564901 | coding | downstream | 207160 | 30245223 ~ 30252675 (+) |
| pglyrp2 | LOC106564993 | coding | downstream | 292940 | 30331003 ~ 30333950 (+) |
| LOC110495158 | LOC106588423 | coding | downstream | 303461 | 30341524 ~ 30342920 (+) |
| G1436951 | NA | non-coding | upstream | 14662 | 30017006 ~ 30019238 (+) |
| G1436921 | NA | non-coding | upstream | 59401 | 29973741 ~ 29974499 (+) |
| G1436829 | kpra | non-coding | upstream | 184847 | 29826664 ~ 29849053 (+) |
| G1436830 | NA | non-coding | upstream | 211072 | 29822527 ~ 29822828 (+) |
| G1436977 | LOC106588346 | non-coding | downstream | 69713 | 30107776 ~ 30109514 (+) |
| G1436980 | NA | non-coding | downstream | 103324 | 30141387 ~ 30142786 (+) |
| G1437083 | NA | non-coding | downstream | 187313 | 30225376 ~ 30225611 (+) |
| G1437088 | NA | non-coding | downstream | 194334 | 30232397 ~ 30232884 (+) |
| G1436554 | NA | other | upstream | 316596 | 29717068 ~ 29717304 (+) |
| LOC110493657 | LOC106564932 | other | upstream | 1007062 | 29022435 ~ 29026838 (+) |
| LOC110493649 | LOC106588056 | other | upstream | 1183369 | 28848883 ~ 28853257 (+) |
| LOC110495133 | LOC106564943 | other | upstream | 1226001 | 28803282 ~ 28810516 (+) |
| LOC110493688 | LOC106564992 | other | downstream | 352638 | 30390554 ~ 30395746 (+) |
| G1437183 | LOC106564893 | other | downstream | 372680 | 30410743 ~ 30414934 (+) |
| G1437734 | NA | other | downstream | 627108 | 30665171 ~ 30666007 (+) |
| G1437911 | LOC106564885 | other | downstream | 889184 | 30927247 ~ 30933584 (+) |
| G1438880 | NA | other | downstream | 1664431 | 31702494 ~ 31705164 (+) |
