Gene
RNA
| Item | Value |
|---|---|
| gene id | G1437799 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 30661117 ~ 30661458 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: proteoglycan 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1646015 | True | 342 | lncRNA | 0.42 | 1 | 30661117 | 30661458 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493696 | LOC106564971 | coding | downstream | 35254 | 30624949 ~ 30625863 (-) |
| LOC110493695 | LOC106564888 | coding | downstream | 40075 | 30563150 ~ 30621042 (-) |
| LOC110493694 | ccdc40 | coding | downstream | 98170 | 30556732 ~ 30562947 (-) |
| LOC110493693 | LOC106564890 | coding | downstream | 112355 | 30536089 ~ 30548762 (-) |
| LOC110493691 | LOC106564893 | coding | downstream | 241907 | 30413145 ~ 30419210 (-) |
| LOC110493700 | LOC106564887 | coding | upstream | 69619 | 30731077 ~ 30781553 (-) |
| LOC110493703 | LOC106564885 | coding | upstream | 265790 | 30927248 ~ 30933785 (-) |
| LOC110493702 | LOC106564884 | coding | upstream | 272712 | 30934170 ~ 30937569 (-) |
| trnaa-ugc-131 | NA | coding | upstream | 448937 | 31110395 ~ 31110470 (-) |
| LOC110493160 | LOC106564877 | coding | upstream | 617442 | 31278900 ~ 31340762 (-) |
| G1437738 | NA | non-coding | downstream | 85617 | 30493729 ~ 30575500 (-) |
| G1437747 | NA | non-coding | downstream | 135745 | 30524622 ~ 30525372 (-) |
| G1437743 | LOC106564892 | non-coding | downstream | 137710 | 30513656 ~ 30523407 (-) |
| G1437839 | NA | non-coding | upstream | 48555 | 30710013 ~ 30710249 (-) |
| G1437842 | LOC107579696 | non-coding | upstream | 52329 | 30713787 ~ 30714455 (-) |
| G1437845 | NA | non-coding | upstream | 55235 | 30716693 ~ 30716905 (-) |
| G1438274 | NA | non-coding | upstream | 88709 | 30750167 ~ 30750371 (-) |
| G1437609 | NA | other | downstream | 192345 | 30467323 ~ 30468772 (-) |
| G1437507 | NA | other | downstream | 418154 | 30241450 ~ 30243706 (-) |
| G1437411 | NA | other | downstream | 546994 | 30050602 ~ 30114123 (-) |
| LOC110495137 | LOC106564911 | other | downstream | 717387 | 29926378 ~ 29979179 (-) |
| G1436694 | NA | other | downstream | 1048509 | 29612252 ~ 29612608 (-) |
| G1438834 | NA | other | upstream | 918809 | 31580267 ~ 31585322 (-) |
| G1439068 | comd1 | other | upstream | 1062359 | 31723817 ~ 31742348 (-) |
| G1440683 | LOC106606817 | other | upstream | 2528377 | 33189835 ~ 33194275 (-) |
