G1437912 (LOC106564884)


Basic Information

Item Value
gene id G1437912
gene name LOC106564884
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 30888838 ~ 30937539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1646138
tttttttttttttttATCATTTTAAAAAAGTCATGTTTATTTGTCATTTATTTGCCGTATTCTTCCTCTTTGTATTGTGTTTATTTTGTGAGGTCGGCAGGACACGTCGCAATCTCAGATGGAAGTGATTTGGGCTTGAGGGTGTACTCCATCTTGCCTGGTTctaagagaaagacagacacacaaacacatttggcATTTTAGTGGTGCGAATATTGAGGACTCAGCTAAGCAGCGTTTGGGAAGCTTTCAAAATGGGACCACAACACATTTTTAttctgggtcgtgttcattagtcatcaaatggaagaaaatggactgaaacatgGAGAGACTAATAAGAAACACTCATTTTTGATTTACGTTGTAAAATGCCATAATGAACGTGACCATGTTATCTTGGTACGACAGGCCTCACCTTTAAAACATTCTGGGGTATTGAGTGTGCCGTCGATGCACTGACTTGCTACTGGAATGCCACACTTCAGCTCCTTGTTCAGACAGTAGAACACAACAGACTCCCCATGAAGGACTCTATTGGGTTTCAGATCCCCAATCCAGATCTTCTTGGCGTTGTAGAAGATGCGACCTCTGTTGATGTTAACTTTACAGGGGGCTGCAGTAAAGCGACGACAAGCAAAGCAACATAACTCTCAGTTTAGAATTGAATAGAATTGGAATAGAATGAAATGAAATAGATCATGGAAATTCTTTAATTTTCTTCTATATCAGTACCCAAACTGACACACCACGTACACAATAGGTTGGGAGCAACACATGGTCAGCCACACAGCAGCGACCCCGGAGAAGTTTTGGGAAtgcagtgccttgctcaaaggcacaacGGCAGTACGCTCTCATTACGCAATCATTTCAGTCATCAAAGATGAAATAAATGGTTGCTGATACACATCTACTCACATGTAAGTCAACAAGCTGGTTTggtatacagacacacacaagtgACATTCCCACAAGAGTAACAACAGTGCAACCTTTTCTATGACTCAATAGCTCGGGTGTGAACTTTCCCCTATAtacagcagaggaggctggtgggaggcacTATAGGAGGAcatgctcattgtaatggctggaatggaatatacGGAACAGAGTccaacatgtggtttccatatgtttgatgtgtttgataccgttccatttaaaccattccagccattacaatgagcttgtcctcctatagcttctcccaccagcctcctctatgTACAGTTATAGGGTCAGCTTcctctcccccaatcctaaccttaaccattagtgagggaaatgcaaaactgaccaaaGATCAGGGTCtaagggcaacttcaccctacactgACTCATTGACTCACCTCTGCAAACAGGCAAAGTGGACCAGTTGCCTGTATTCTGACACTGTATTTCCTCAGAGCCGTCCAGAACGTAGTGTTCCTGGCACTGGTACTTGACCTTCTCCTTGTAGCCAACCTCCCTCATCACAGCAAAGGTGATGATGCCGTGGTCTATCGTTGGTGGGATGGAGCAACTCACCTCTGCAACAGGTCAGAAAAGTCATGGGCTAGTGAAAGTGCATTAACAATGCAATAACCTATTTCAAGTAATATTGTCAGGGTTAATCTAAATTCAAAATAATTAAATTAAGGCATAAACAGAGGAAGATGGATTATGCAAATGTATCAATTgtcaacatttggaaagtttgcCAAATAAATTTGCTGACCTCCAAGGGGCCcctattgattttgttagtcactctcactcagatatcattaacatggcataagtaatggcaaaatgggtagaattgcaggaaatgagcttttaatttttttttttttaaatgatctccACCCCTTGGCAAAATGGGAAGAATTGCAGGGAATTAACTATAcaacatttttggggggcaaCCAAATCTCAAGTAGGGCCCCAAAAGGCTAGATCCATGTAATAAAGTGACCTAAAAGATCATTGATAATTTATCAGTGGTTCAACCAAAAACTTCTCAACCAATTAGATTTGTTCACCAACCATTTGGCTTATGCTGCCACTGTCTGCACCTACCCTTGCATACCGGTGGCTCAGTCACGTTTCCACTGGCCAAGCACGATCCTCTCTCGTTACCAATAGGAGCTCTTGGTGGCAAACACTCATACGTCCAACTCTGTCCGTACTGGATTTCATTGCCAGTGAACTTCTTATTGTCATAGACAATTTTACCATGCATAGGTGCTTGAGGCAGAGCACAACTCACAGCTGCAGGGAAGAAATATTTTAAATAATTTAGACTACATTTTCATATTTAGACAAACTATGGAGAAAAGCAATGTTACATTCTTGAGGTATGGTATACCTTTACACATTGGTGGTGGTGCACTGAGGGTACCGTCGTGTAAACACACACTCTCATTGGCTCCTATCATGACGTACCTGAAGAACACAAATTCTTATTGGTCTGAGATGCAGAGTCAGCTAAATGTAGTCAGAACTAAACCACACTGAATTTCCCTCACCCATCATCACATGTGTAGTTGAGCACACTCTTGAATGGCACGTCAATCATCCCTGGCTTTTGCATAGGCTTGGGGAGAGGACACATCTTTGCTGTGTCAAAAAATGTATAAGATTCACGTGGATATGATTTATGCCTTTTATGTTGTTAATAAAATATATTACCATATCCCTATCCCCTTGCTAAAGTCTGGACTGtccatggtactgtatatgtgactTTAGGGTTCCGGAATTCTCAGAAacattcccaggttttccagaaatcccagttggaagatTCCTTGAATCAAGGGAcaaataagcaggaaatctggaaAACCCAACAATTTACCTGAATTTATGCTTCACATTATGTAATGGATGTTTTGTGAATGGGTTGGAACTTACGAGAACACACAAGGTCCACTTTGGTCCACTCTCCCGAGGCCAAGCAGGTGATCCTGGCAGTCTTGGCTTTCCCAGGTGTGTATCCCCGCTCACACACCAGGGTCACCTCTTTTCCAATCTCGTACTCACGCtttagacccagtgtatctatacCGTCGGTCACGGGTGGGTGGCCACATACTTCTTGGATGTCACTGACGTATACAAGGCAAGCTGGCAGAGCAGCAGCAAAGCCAGGGTTGGGTTCATCTTTTGCGGGGTTGAGAGAGACTGTGTCCGTTCTCCCGGCAGTGGACGGTGGAAAATGTA

Function

NR:

description
beta-2-glycoprotein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1646138 True 3213 lncRNA 0.43 3 30888838 30937539
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110493692 LOC106564892 coding upstream 364318 30494128 ~ 30524520 (+)
LOC110493688 LOC106564992 coding upstream 493092 30390554 ~ 30395746 (+)
LOC110493686 LOC106564896 coding upstream 512968 30364642 ~ 30375870 (+)
LOC110493685 ngap coding upstream 530838 30344671 ~ 30358000 (+)
LOC110495158 LOC106588423 coding upstream 545918 30341524 ~ 30342920 (+)
LOC110493701 LOC106564882 coding downstream 5952 30943491 ~ 31160687 (+)
LOC110493704 LOC106585659 coding downstream 228763 31166302 ~ 31198722 (+)
LOC110493705 LOC106564880 coding downstream 277391 31214930 ~ 31245583 (+)
LOC110493706 LOC106585672 coding downstream 319361 31256900 ~ 31277824 (+)
LOC110493710 LOC106564871 coding downstream 415943 31353482 ~ 31433958 (+)
G1437932 NA non-coding upstream 48369 30840196 ~ 30840469 (+)
G1437926 NA non-coding upstream 61928 30826705 ~ 30826910 (+)
G1437924 NA non-coding upstream 63639 30824997 ~ 30825199 (+)
G1437923 NA non-coding upstream 64256 30823861 ~ 30824582 (+)
G1437904 NA non-coding upstream 81760 30806871 ~ 30807078 (+)
G1438050 NA non-coding downstream 134925 31072464 ~ 31077408 (+)
G1438051 NA non-coding downstream 136390 31073929 ~ 31078909 (+)
G1438052 NA non-coding downstream 136620 31074159 ~ 31079006 (+)
G1438053 NA non-coding downstream 142002 31079541 ~ 31088718 (+)
G1438054 NA non-coding downstream 149012 31086551 ~ 31086862 (+)
G1437734 NA other upstream 222831 30665171 ~ 30666007 (+)
G1437183 LOC106564893 other upstream 473904 30410743 ~ 30414934 (+)
G1436967 NA other upstream 850775 30033900 ~ 30038063 (+)
G1436829 kpra other upstream 1039785 29826664 ~ 29849053 (+)
G1438880 NA other downstream 764955 31702494 ~ 31705164 (+)
G1438941 LOC106564856 other downstream 968983 31906522 ~ 31907498 (+)
LOC110493164 LOC106564854 other downstream 1035901 31973440 ~ 31976221 (+)
ero1b LOC106586106 other downstream 1436076 32352949 ~ 32378308 (+)
rbm34 LOC106564828 other downstream 1662697 32562173 ~ 32662021 (+)

Expression

G1437912(LOC106564884) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

G1437912(LOC106564884) Expression in each Bioproject

Bar chart with 17 bars.
G1437912(LOC106564884) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
End of interactive chart.

Co-expression Network