G1438815


Basic Information

Item Value
gene id G1438815
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 31588690 ~ 31588938 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1647127
AAATAAATACTACCATGCAAGTCCACTATTGGGTTCTTGCCCTAATGTTTTGGTAAGAAAACAAACAGGCAAACAAtcaaaaaaacaattggataaaAAAACGACTTTCGTAATGCATCCAACAATATCATCCTTCAGCGACTGAAAGAGAGGTGCCTTTTTGACTCTGAACAAGACTGGGTAACACTGCCTAGAATGACACAAAACTAGTACTATGGTACAAAAAAGGAGGAGAACGGTAacaaccta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1647127 True 249 lncRNA 0.37 1 31588690 31588938

Neighbor

gene id symbol gene type direction distance location
LOC110493717 LOC106564867 coding upstream 3504 31578647 ~ 31585186 (+)
LOC110493716 LOC106564869 coding upstream 22976 31550400 ~ 31565714 (+)
LOC110493714 LOC106564868 coding upstream 69121 31514736 ~ 31519569 (+)
LOC118940684 NA coding upstream 69848 31518708 ~ 31518842 (+)
LOC118940685 NA coding upstream 71240 31517326 ~ 31517450 (+)
LOC110493718 LOC106564865 coding downstream 5324 31594262 ~ 31608502 (+)
LOC110493719 LOC100380723 coding downstream 22501 31611439 ~ 31624829 (+)
LOC118940675 NA coding downstream 29984 31618922 ~ 31619054 (+)
LOC118940670 NA coding downstream 33792 31622730 ~ 31622866 (+)
LOC118940671 NA coding downstream 35232 31624170 ~ 31624304 (+)
G1438791 NA non-coding upstream 54941 31533431 ~ 31533749 (+)
G1438784 NA non-coding upstream 60031 31528400 ~ 31528659 (+)
G1438782 NA non-coding upstream 60428 31527944 ~ 31528262 (+)
G1438267 NA non-coding upstream 62659 31525718 ~ 31526031 (+)
G1438264 NA non-coding upstream 74747 31513713 ~ 31513943 (+)
G1438816 NA non-coding downstream 74 31589012 ~ 31589251 (+)
G1438818 NA non-coding downstream 6378 31595316 ~ 31595747 (+)
G1438819 NA non-coding downstream 9604 31598542 ~ 31598807 (+)
G1438820 NA non-coding downstream 10155 31599093 ~ 31599453 (+)
G1438852 NA non-coding downstream 20626 31609564 ~ 31609854 (+)
G1437911 LOC106564885 other upstream 655106 30927247 ~ 30933584 (+)
G1437734 NA other upstream 922683 30665171 ~ 30666007 (+)
G1437183 LOC106564893 other upstream 1173756 30410743 ~ 30414934 (+)
LOC110493688 LOC106564992 other upstream 1193040 30390554 ~ 30395746 (+)
G1436967 NA other upstream 1550627 30033900 ~ 30038063 (+)
G1438880 NA other downstream 113556 31702494 ~ 31705164 (+)
G1438941 LOC106564856 other downstream 317584 31906522 ~ 31907498 (+)
LOC110493164 LOC106564854 other downstream 384502 31973440 ~ 31976221 (+)
ero1b LOC106586106 other downstream 784677 32352949 ~ 32378308 (+)
rbm34 LOC106564828 other downstream 1011298 32562173 ~ 32662021 (+)

Expression


Co-expression Network