G1438818


Basic Information

Item Value
gene id G1438818
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 31595316 ~ 31595747 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1647130
ACCATAGGTCAAGTCTCACAGTTTGCCGATGACCTCTGCTACTGGTCCAGCTCCAAATGTCCTCAACTTGCTGCAAAAAAACTCCAGAAGTCTATTGAAATGATCGAGTCGTGGTCTAACATGTGGCGAGTAAAATTGAACCCACAAAAGACCCAATGCGTCCTCTTCACAAGAAGCACCAGCAAGAAAACCAGGAAACCCATAGATCTCAAACTCTACGGTGAAACAATAAAAGTAGAAAAATAAGCAAAATTCCATGGAGTCACCTTCCAGAAGAACATGCGCTGGACAATCCATATAGCGAACATAGAGAGAGCGTGACGAAAAAGACTAAACCACCTAAAAACGCTGTGCGGAAGAAAATATGGAGCCTCACCTCAGACAGTGTCGAAAGTCTACATCAGCTACATCCGACCCCTCTGTGAATACGCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106537159, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1647130 True 432 lncRNA 0.45 1 31595316 31595747

Neighbor

gene id symbol gene type direction distance location
LOC110493717 LOC106564867 coding upstream 10130 31578647 ~ 31585186 (+)
LOC110493716 LOC106564869 coding upstream 29602 31550400 ~ 31565714 (+)
LOC118940684 NA coding upstream 76474 31518708 ~ 31518842 (+)
LOC118940685 NA coding upstream 77866 31517326 ~ 31517450 (+)
LOC118940650 NA coding upstream 78881 31516308 ~ 31516435 (+)
LOC110493719 LOC100380723 coding downstream 15692 31611439 ~ 31624829 (+)
LOC118940675 NA coding downstream 23175 31618922 ~ 31619054 (+)
LOC118940670 NA coding downstream 26983 31622730 ~ 31622866 (+)
LOC118940671 NA coding downstream 28423 31624170 ~ 31624304 (+)
LOC110493162 LOC106564875 coding downstream 30452 31626199 ~ 31692221 (+)
G1438816 NA non-coding upstream 6065 31589012 ~ 31589251 (+)
G1438815 NA non-coding upstream 6378 31588690 ~ 31588938 (+)
G1438791 NA non-coding upstream 61567 31533431 ~ 31533749 (+)
G1438784 NA non-coding upstream 66657 31528400 ~ 31528659 (+)
G1438782 NA non-coding upstream 67054 31527944 ~ 31528262 (+)
G1438819 NA non-coding downstream 2795 31598542 ~ 31598807 (+)
G1438820 NA non-coding downstream 3346 31599093 ~ 31599453 (+)
G1438852 NA non-coding downstream 13817 31609564 ~ 31609854 (+)
G1438854 NA non-coding downstream 15049 31610796 ~ 31611011 (+)
G1437911 LOC106564885 other upstream 661732 30927247 ~ 30933584 (+)
G1437734 NA other upstream 929309 30665171 ~ 30666007 (+)
G1437183 LOC106564893 other upstream 1180382 30410743 ~ 30414934 (+)
LOC110493688 LOC106564992 other upstream 1199666 30390554 ~ 30395746 (+)
G1436967 NA other upstream 1557253 30033900 ~ 30038063 (+)
G1438880 NA other downstream 106747 31702494 ~ 31705164 (+)
G1438941 LOC106564856 other downstream 310775 31906522 ~ 31907498 (+)
LOC110493164 LOC106564854 other downstream 377693 31973440 ~ 31976221 (+)
ero1b LOC106586106 other downstream 777868 32352949 ~ 32378308 (+)
rbm34 LOC106564828 other downstream 1004489 32562173 ~ 32662021 (+)

Expression


Co-expression Network