Gene
RNA
| Item | Value |
|---|---|
| gene id | G1438952 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 31808476 ~ 31808752 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1647281 | True | 277 | lncRNA | 0.30 | 1 | 31808476 | 31808752 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493724 | LOC106564991 | coding | upstream | 39316 | 31758530 ~ 31769160 (+) |
| LOC110493723 | LOC106564859 | coding | upstream | 51167 | 31744531 ~ 31758155 (+) |
| LOC110493722 | comd1 | coding | upstream | 65277 | 31723035 ~ 31743199 (+) |
| LOC110493162 | LOC106564875 | coding | upstream | 116255 | 31626199 ~ 31692221 (+) |
| cmdg | LOC106585868 | coding | downstream | 51591 | 31860343 ~ 31871765 (+) |
| LOC110493726 | ugpa | coding | downstream | 64903 | 31873655 ~ 31892096 (+) |
| LOC110493164 | LOC106564854 | coding | downstream | 165485 | 31973440 ~ 31976221 (+) |
| LOC110493728 | LOC106585894 | coding | downstream | 167843 | 31976595 ~ 31990436 (+) |
| LOC110493731 | LOC106585927 | coding | downstream | 209672 | 32018424 ~ 32042767 (+) |
| G1438886 | LOC106564863 | non-coding | upstream | 97268 | 31709932 ~ 31711208 (+) |
| G1438854 | NA | non-coding | upstream | 197465 | 31610796 ~ 31611011 (+) |
| G1438852 | NA | non-coding | upstream | 198622 | 31609564 ~ 31609854 (+) |
| G1438954 | NA | non-coding | downstream | 1434 | 31810186 ~ 31810424 (+) |
| G1438992 | NA | non-coding | downstream | 96038 | 31904790 ~ 31905014 (+) |
| G1438943 | NA | non-coding | downstream | 96545 | 31905297 ~ 31906117 (+) |
| G1438993 | LOC106585841 | non-coding | downstream | 99315 | 31908067 ~ 31908297 (+) |
| G1438994 | NA | non-coding | downstream | 100087 | 31908839 ~ 31909342 (+) |
| G1438880 | NA | other | upstream | 103312 | 31702494 ~ 31705164 (+) |
| G1437911 | LOC106564885 | other | upstream | 874892 | 30927247 ~ 30933584 (+) |
| G1437734 | NA | other | upstream | 1142469 | 30665171 ~ 30666007 (+) |
| G1437183 | LOC106564893 | other | upstream | 1393542 | 30410743 ~ 30414934 (+) |
| LOC110493688 | LOC106564992 | other | upstream | 1412826 | 30390554 ~ 30395746 (+) |
| G1438941 | LOC106564856 | other | downstream | 97770 | 31906522 ~ 31907498 (+) |
| ero1b | LOC106586106 | other | downstream | 564863 | 32352949 ~ 32378308 (+) |
| rbm34 | LOC106564828 | other | downstream | 791484 | 32562173 ~ 32662021 (+) |
| G1439962 | LOC106564826 | other | downstream | 904108 | 32712860 ~ 32766707 (+) |
