G1439480


Basic Information

Item Value
gene id G1439480
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 32040823 ~ 32042755 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1647909
ACATTGCTTTATTTAAAATCAGCGGTAGGCAGTTATGCTATGAACGAAAACAAAgaaaagaggggaaaaaaaagCAACCAAAAATAAGATCCAGCTACAATAACTGCACTTGGCACTGGATGACCTTTTTGTCAAAAAAGAAAATTATACATACACAATTGTGTAAGTGCCTCCAATATACATATGAAAACCAAAAGAGGAAAACCTTTAAATACCAGCTTTTATGTGGTCTCCATGACACCCAAATTGTTATTAATATTACAAATGTTCAACTCCCCCAACAAATCCCCAACCCTAATAACACCTGATctcaaaaaaaatgtatcttcacTGGAGCTGAGACTATGGAGAGTTCCTACTGGTCTCAGAATGACTTCCTCTCTAAACAGGTTACGTACGGTTCAGTACGCCCTTAACAACAAGTCCTAGGTCTGATGGATTGTTGAGCTCACAATGGTTAAAGGATAGGCCCTGGGATAGAGATCCTAGACCTGTTGTTGGAGGAAAAACTAACCCcgaccttaaaaaaaaaaaacaatggacTCGTGTGTCCAACAGCCATGATGAGGACGACACGTCCTCACTCTTTATTTTGAGTAATGCACTGCAAAAGAAATACACAAAACCGTACAAATAACACGTCTGACAAAACAAAAGGCAAAACCTCTTCTCCTCCAAAAGGAAAGCGCATCAGCAAACTGAATGTGAACACAAAACGTGACTCCAATTACAAGGCTGAGCAGTCCTCATTGGAATTGAATGCATGGCAAATATTTGCCATCAGTGGAATGAAATgcctttttttattatttttttttaaatcgtgaGGGAAGGCCAACCGTTTCTTTTAGTCATCACCACATCCCCCTTACGACACACTGTTTGGATATGGGAGTCGGACAAGTGGGCAGGTGGACCCTGTGAGAAGGAGAAGCATGCCCCATAAACCACCTGCCCTCTAACCCACCATCATCCCCTGACCTCTCAACATTAAAACAACCTTAAATTAACCTCGGGGATAAACAGAGTGTGTACCCATTCGTTATGAGGGACTCAAGAGGAGCAAGCAATCCCACTGCTGATTAAGACAAAAGACGAAGATAAGCAGAAGGGTGGATTTAAGAAGGGCAGCTTGCCTTTGATGGGGGCCCCTTGTGTACCCCGTGCCCACAACACAGGGGAATCCAACACCCCCTCTATAAATTAATCCCTAATAATAATTGACTTCACCATTGGGATCGTGTTTTGCCAGAATAAGTTGGGCAACATGATTTAAACTATTCCCAGGAGACGCGTTGTTAGCACCTCATCTATCTCCTCCCACCTCCCCAACCCCGCCAGTCTGTCCCAGCATGCCCttggagagagtgagtgagcgaATCTGGGACAGGTGGTAAAAAAAAAGATGACCGCATCGAGAAGATGAGGGacgcatcccaaattgcaccatattccctagatagtgcactacttttaaccagaccccatagggtagtgcactaagggaatagggtgccatttcagacttaGCCCAGACATGTACATCTTGGAGGGGGTTTATCTGACGGTGACCCCTAGCTTCTCCAGGACACGTATCCCCTTCTCCTGGTACTCCTCCCTCGTCAGCCAGAAGTTGTCCTTGTCCTTCATGATGTCGGCCAGCACGGCCCCGCCCAGGAACACCATGTGCTTGCGCCGAGGGGGGTCCTCGATGCGGATCTTGAATTTCTGCACACGAGCAGGAAAGGAGAGACAGAATAGAAGATAAGGAGAAGGGAAGAGTGTGAGAAGGGAAAACAAGagcataaggggggggggggggggggggagaggagaaataAGGAAAGGGGCAAAAGAGGAGAAGGAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1647909 True 1869 lncRNA 0.45 2 32040823 32042755
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110493730 LOC105021598 coding downstream 27159 32008627 ~ 32013664 (-)
LOC110493729 LOC106564851 coding downstream 39666 31991752 ~ 32001157 (-)
LOC110493727 LOC106585880 coding downstream 75865 31911571 ~ 31964958 (-)
LOC110493163 LOC106564856 coding downstream 130011 31892360 ~ 31910812 (-)
LOC110493720 LOC106564863 coding downstream 323038 31701343 ~ 31717785 (-)
LOC110493732 LOC106564848 coding upstream 12750 32055505 ~ 32089637 (-)
LOC110493736 LOC105021516 coding upstream 137010 32179765 ~ 32200258 (-)
LOC110493735 cb032 coding upstream 158051 32200806 ~ 32203474 (-)
LOC110493737 fbxo48 coding upstream 162492 32205247 ~ 32210501 (-)
LOC110493166 LOC106564843 coding upstream 189124 32231879 ~ 32234640 (-)
G1439243 NA non-coding downstream 71470 31968986 ~ 31969353 (-)
G1439240 NA non-coding downstream 73236 31967349 ~ 31967587 (-)
G1439169 NA non-coding downstream 148727 31891600 ~ 31892096 (-)
G1439155 NA non-coding downstream 171620 31863981 ~ 31869203 (-)
G1439069 NA non-coding downstream 297696 31742728 ~ 31743127 (-)
G1439502 NA non-coding upstream 9467 32052222 ~ 32052486 (-)
G1439555 NA non-coding upstream 105265 32148020 ~ 32148426 (-)
G1439570 NA non-coding upstream 127537 32170292 ~ 32170639 (-)
G1439571 NA non-coding upstream 128188 32170943 ~ 32171455 (-)
G1439583 NA non-coding upstream 172651 32215406 ~ 32215607 (-)
G1439068 comd1 other downstream 298475 31723817 ~ 31742348 (-)
G1438834 NA other downstream 455501 31580267 ~ 31585322 (-)
LOC110493160 LOC106564877 other downstream 756775 31278900 ~ 31340762 (-)
LOC110493700 LOC106564887 other downstream 1305237 30731077 ~ 30781553 (-)
G1437609 NA other downstream 1572051 30467323 ~ 30468772 (-)
G1440683 LOC106606817 other upstream 1147080 33189835 ~ 33194275 (-)
G1440711 NA other upstream 1195866 33238621 ~ 33252379 (-)
G1440781 NA other upstream 1339146 33381901 ~ 33382719 (-)
G1440786 NA other upstream 1343182 33385937 ~ 33386528 (-)
LOC110493763 LOC106564812 other upstream 1370369 33413110 ~ 33515866 (-)

Expression

G1439480 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
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G1439480 Expression in each Bioproject

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G1439480 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network