XLOC_003374


Basic Information

Item Value
gene id XLOC_003374
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 17093078 ~ 17170177 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008579
aaaaaaaactgtaacgcaaaacgtcaaaacaaacataatttattGATATTAACCTTAGTGCAAACAGCTTTCGAGAGCCGCGTTGTTTCCAGCAATGAAGAAAAACTGCATGATTCATGGGTGAACTTTAAGAGTACATCAAGCTGTGTGAATGTCAACAGCTGACATGGCCAGCAGGAGCATCAGAGCAgacctcattaatattcacgaccCTTCCTAATAAGTTTCACCACATGGTCCCACAATGCCACTGTTGGCAGTCTTGGAGACCAGCGAACGTCTCAGAGAACAGCAGGACGAAAAACACCCTTTGGCGAGGCTCACTGTCTGCACTCAAGTCGAACCGTGTTCCTACCGTCAGAAATGAATCTGGGATTTAAGCATCAGTTGGGGAAGTCAAGTGCTTTATCTGTCCGATCTGGATTCACTCATCTACACTGGTTGCTCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008579 True 448 lncRNA 0.45 3 17093078 17170177

Neighbor

gene id symbol gene type direction distance location
XLOC_003373 kbtbd8 coding upstream 505034 16574625 ~ 16588044 (+)
XLOC_003372 slc25a26 coding upstream 768503 16216909 ~ 16324575 (+)
XLOC_003371 tada3l coding upstream 913888 16152316 ~ 16179190 (+)
XLOC_003370 pimr204 coding upstream 951542 16137302 ~ 16141536 (+)
XLOC_003368 ctbs coding upstream 1009470 16070438 ~ 16083608 (+)
XLOC_003376 CR631124.1 coding downstream 158388 17328565 ~ 17328681 (+)
XLOC_003377 BX571952.1 coding downstream 270414 17440591 ~ 17513632 (+)
XLOC_003378 CR589944.3 coding downstream 748966 17919143 ~ 17920013 (+)
XLOC_003379 NA coding downstream 760096 17930273 ~ 17932158 (+)
XLOC_003380 NA coding downstream 781386 17951563 ~ 17952558 (+)
XLOC_003369 CR854846.2 misc upstream 969996 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 4381082 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 4398815 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 4407479 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 4413050 12679732 ~ 12680028 (+)
XLOC_003363 FP016142.2 non-coding upstream 1291682 15799383 ~ 15801396 (+)
XLOC_003362 FP016142.6 non-coding upstream 1313827 15776072 ~ 15779251 (+)
XLOC_003359 NA non-coding upstream 1751665 15339344 ~ 15341413 (+)
XLOC_003358 CR550302.2 non-coding upstream 2074554 15017185 ~ 15018524 (+)

Expression


Co-expression Network