G1439960


Basic Information

Item Value
gene id G1439960
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 32711838 ~ 32712418 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1648450
tgtatatactgtactctatatcatctactgcatctttatgtaatacatgtatcactcgccaatttaactatgccactttgtttacatactctcatatgtatatactgcactcaataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatctgtatgtacatattctttatccccttacacttgtgtctataaggtagtagttttggaattgttagctagattacttgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaatcaaatttgatttgatttctatgTGAACttggtcaggtcacccaaaaagttacatattgcagctgcAACTTTGCCATCAAATCAAAATACAATGACATTTGGTGGTAGCTGTTTATATTTTCTCTCATTGGTAAAACTACGTAAAAATGAGCACCAGAACAAACCAGGAAAACAAAATTATCTCACAATACTGTTCATTTCTTGACCTGTCTTTTTCAAGCGAGACAAATGTCCCTCTAGACcaggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1648450 True 581 lncRNA 0.36 1 32711838 32712418

Neighbor

gene id symbol gene type direction distance location
rbm34 LOC106564828 coding upstream 50076 32562173 ~ 32662021 (+)
LOC110493748 LOC106564832 coding upstream 151328 32499046 ~ 32560510 (+)
LOC110493746 LOC106564833 coding upstream 233262 32447495 ~ 32478576 (+)
LOC110493168 NA coding upstream 270046 32439735 ~ 32441792 (+)
LOC110495166 NA coding upstream 286576 32423006 ~ 32425262 (+)
strn LOC106564825 coding downstream 133802 32846220 ~ 32933183 (+)
LOC110493756 LOC106564824 coding downstream 262420 32974838 ~ 32984904 (+)
iip2 iip2 coding downstream 274258 32986676 ~ 32988014 (+)
LOC110493759 LOC106564822 coding downstream 323580 33035998 ~ 33037993 (+)
LOC110493760 LOC106564819 coding downstream 357338 33069756 ~ 33076669 (+)
G1439952 NA non-coding upstream 6615 32704956 ~ 32705223 (+)
G1439944 NA non-coding upstream 14046 32697561 ~ 32697792 (+)
G1439936 NA non-coding upstream 19610 32692016 ~ 32692228 (+)
G1439793 NA non-coding upstream 35389 32676198 ~ 32676449 (+)
G1439792 NA non-coding upstream 35859 32675624 ~ 32675979 (+)
G1440005 NA non-coding downstream 59003 32771421 ~ 32771697 (+)
G1440006 NA non-coding downstream 59526 32771944 ~ 32772151 (+)
G1440048 NA non-coding downstream 62222 32774640 ~ 32774914 (+)
G1440069 NA non-coding downstream 87733 32800151 ~ 32800350 (+)
G1440071 NA non-coding downstream 89003 32801421 ~ 32801731 (+)
ero1b LOC106586106 other upstream 333530 32352949 ~ 32378308 (+)
LOC110493164 LOC106564854 other upstream 735617 31973440 ~ 31976221 (+)
G1438941 LOC106564856 other upstream 804340 31906522 ~ 31907498 (+)
G1438880 NA other upstream 1006674 31702494 ~ 31705164 (+)
G1439962 LOC106564826 other downstream 442 32712860 ~ 32766707 (+)
G1440066 NA other downstream 84680 32797098 ~ 32797432 (+)
G1440162 NA other downstream 239382 32951800 ~ 32956057 (+)
G1440890 LOC106564813 other downstream 811781 33524199 ~ 33524534 (+)
G1441315 NA other downstream 1263775 33976193 ~ 33976475 (+)

Expression


Co-expression Network