G1440005


Basic Information

Item Value
gene id G1440005
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 32771421 ~ 32771697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1648497
CACATGCCCTGTCTCGCTCGCCCAGTCAgctgtgtggagagagaatgaaagagagagagacacaagggGGACACGTAGGCTACTGTAGGTGCACCAGTGAACAATGTGTCCTATTTCTCTGCAGCCTAAGGCAGAAGAGGCAAATGAGCACTGAGCAGTAATAGCAGTGTGGGCTATTTGCATCCAGGACAATGTGCCCATGTGAACGGTGTATAAGCAAATCCCATGCGATGGCTGGGAGAGATACTGTAGTTATTAAAATAGAAAGGAAAAGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1648497 True 277 lncRNA 0.48 1 32771421 32771697

Neighbor

gene id symbol gene type direction distance location
rbm34 LOC106564828 coding upstream 109659 32562173 ~ 32662021 (+)
LOC110493748 LOC106564832 coding upstream 210911 32499046 ~ 32560510 (+)
LOC110493746 LOC106564833 coding upstream 292845 32447495 ~ 32478576 (+)
LOC110493168 NA coding upstream 329629 32439735 ~ 32441792 (+)
LOC110495166 NA coding upstream 346159 32423006 ~ 32425262 (+)
strn LOC106564825 coding downstream 74523 32846220 ~ 32933183 (+)
LOC110493756 LOC106564824 coding downstream 203141 32974838 ~ 32984904 (+)
iip2 iip2 coding downstream 214979 32986676 ~ 32988014 (+)
LOC110493759 LOC106564822 coding downstream 264301 33035998 ~ 33037993 (+)
LOC110493760 LOC106564819 coding downstream 298059 33069756 ~ 33076669 (+)
G1439960 NA non-coding upstream 59003 32711838 ~ 32712418 (+)
G1439952 NA non-coding upstream 66198 32704956 ~ 32705223 (+)
G1439944 NA non-coding upstream 73629 32697561 ~ 32697792 (+)
G1439936 NA non-coding upstream 79193 32692016 ~ 32692228 (+)
G1439793 NA non-coding upstream 94972 32676198 ~ 32676449 (+)
G1440006 NA non-coding downstream 247 32771944 ~ 32772151 (+)
G1440048 NA non-coding downstream 2943 32774640 ~ 32774914 (+)
G1440069 NA non-coding downstream 28454 32800151 ~ 32800350 (+)
G1440071 NA non-coding downstream 29724 32801421 ~ 32801731 (+)
G1440076 NA non-coding downstream 33295 32804992 ~ 32805237 (+)
G1439962 LOC106564826 other upstream 4714 32712860 ~ 32766707 (+)
ero1b LOC106586106 other upstream 393113 32352949 ~ 32378308 (+)
LOC110493164 LOC106564854 other upstream 795200 31973440 ~ 31976221 (+)
G1438941 LOC106564856 other upstream 863923 31906522 ~ 31907498 (+)
G1440066 NA other downstream 25401 32797098 ~ 32797432 (+)
G1440162 NA other downstream 180103 32951800 ~ 32956057 (+)
G1440890 LOC106564813 other downstream 752502 33524199 ~ 33524534 (+)
G1441315 NA other downstream 1204496 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 1518344 34290017 ~ 34317682 (+)

Expression


Co-expression Network