G1440088


Basic Information

Item Value
gene id G1440088
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 32818205 ~ 32818432 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1648584
cttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatactctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcgttcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1648584 True 228 lncRNA 0.43 1 32818205 32818432

Neighbor

gene id symbol gene type direction distance location
rbm34 LOC106564828 coding upstream 156443 32562173 ~ 32662021 (+)
LOC110493748 LOC106564832 coding upstream 257695 32499046 ~ 32560510 (+)
LOC110493746 LOC106564833 coding upstream 339629 32447495 ~ 32478576 (+)
LOC110493168 NA coding upstream 376413 32439735 ~ 32441792 (+)
LOC110495166 NA coding upstream 392943 32423006 ~ 32425262 (+)
strn LOC106564825 coding downstream 27788 32846220 ~ 32933183 (+)
LOC110493756 LOC106564824 coding downstream 156406 32974838 ~ 32984904 (+)
iip2 iip2 coding downstream 168244 32986676 ~ 32988014 (+)
LOC110493759 LOC106564822 coding downstream 217566 33035998 ~ 33037993 (+)
LOC110493760 LOC106564819 coding downstream 251324 33069756 ~ 33076669 (+)
G1440083 NA non-coding upstream 3998 32814007 ~ 32814207 (+)
G1440076 NA non-coding upstream 12968 32804992 ~ 32805237 (+)
G1440071 NA non-coding upstream 16474 32801421 ~ 32801731 (+)
G1440069 NA non-coding upstream 17855 32800151 ~ 32800350 (+)
G1440048 NA non-coding upstream 43291 32774640 ~ 32774914 (+)
G1440101 NA non-coding downstream 14267 32832699 ~ 32832962 (+)
G1440102 NA non-coding downstream 15388 32833820 ~ 32834136 (+)
G1440105 NA non-coding downstream 18218 32836650 ~ 32837512 (+)
G1440138 NA non-coding downstream 82144 32900576 ~ 32938762 (+)
G1440155 NA non-coding downstream 120911 32939343 ~ 32939760 (+)
G1440066 NA other upstream 20773 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 51498 32712860 ~ 32766707 (+)
ero1b LOC106586106 other upstream 439897 32352949 ~ 32378308 (+)
LOC110493164 LOC106564854 other upstream 841984 31973440 ~ 31976221 (+)
G1440162 NA other downstream 133368 32951800 ~ 32956057 (+)
G1440890 LOC106564813 other downstream 705767 33524199 ~ 33524534 (+)
G1441315 NA other downstream 1157761 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 1471609 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 2350466 35120694 ~ 35184540 (+)

Expression


Co-expression Network