G1440102


Basic Information

Item Value
gene id G1440102
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 32833820 ~ 32834136 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1648598
GTTACAGTACAAATCTTTTCATTACTTATCTTTCTTATGTTGACCTTTTGGGATCCacaatttgttattttttatttaacctttatttaactagtcaagtcagttaagaacaaattcttatttacaatgacggcctaggaacagtgggttaactgcattgttcaggggcagaacgacagatttttacattgtcagctcagggattcaatctagcaacctatcggatactggcccaacgctctaaccactaggctacctgccgccgcgAAATAATAGGAAACAACTGTACAAAACCTCAAGGGATAATATGCATACAG

Function

NR:

description
PREDICTED: oligosaccharyltransferase complex subunit ostc isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1648598 True 317 lncRNA 0.38 1 32833820 32834136

Neighbor

gene id symbol gene type direction distance location
rbm34 LOC106564828 coding upstream 172058 32562173 ~ 32662021 (+)
LOC110493748 LOC106564832 coding upstream 273310 32499046 ~ 32560510 (+)
LOC110493746 LOC106564833 coding upstream 355244 32447495 ~ 32478576 (+)
LOC110493168 NA coding upstream 392028 32439735 ~ 32441792 (+)
LOC110495166 NA coding upstream 408558 32423006 ~ 32425262 (+)
strn LOC106564825 coding downstream 12084 32846220 ~ 32933183 (+)
LOC110493756 LOC106564824 coding downstream 140702 32974838 ~ 32984904 (+)
iip2 iip2 coding downstream 152540 32986676 ~ 32988014 (+)
LOC110493759 LOC106564822 coding downstream 201862 33035998 ~ 33037993 (+)
LOC110493760 LOC106564819 coding downstream 235620 33069756 ~ 33076669 (+)
G1440101 NA non-coding upstream 858 32832699 ~ 32832962 (+)
G1440088 NA non-coding upstream 15388 32818205 ~ 32818432 (+)
G1440083 NA non-coding upstream 19613 32814007 ~ 32814207 (+)
G1440076 NA non-coding upstream 28583 32804992 ~ 32805237 (+)
G1440071 NA non-coding upstream 32089 32801421 ~ 32801731 (+)
G1440105 NA non-coding downstream 2514 32836650 ~ 32837512 (+)
G1440138 NA non-coding downstream 66440 32900576 ~ 32938762 (+)
G1440155 NA non-coding downstream 105207 32939343 ~ 32939760 (+)
G1440168 NA non-coding downstream 133840 32967976 ~ 32968176 (+)
G1440191 LOC106564821 non-coding downstream 176866 33011002 ~ 33016863 (+)
G1440066 NA other upstream 36388 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 67113 32712860 ~ 32766707 (+)
ero1b LOC106586106 other upstream 455512 32352949 ~ 32378308 (+)
LOC110493164 LOC106564854 other upstream 857599 31973440 ~ 31976221 (+)
G1440162 NA other downstream 117664 32951800 ~ 32956057 (+)
G1440890 LOC106564813 other downstream 690063 33524199 ~ 33524534 (+)
G1441315 NA other downstream 1142057 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 1455905 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 2334762 35120694 ~ 35184540 (+)

Expression


Co-expression Network