G1440105



Basic Information


Item Value
gene id G1440105
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 32836650 ~ 32837512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1648601
attttttattttatttcacctttatttaaccaggtaggctagttgagaacaagttctcatttgcaactgcgacctggccaagataaagcatagcagtgtgaacagacaacacagagttacacatggagtaaacaattaacaagtcaataacacagtagaaaacaaaggggggagtctatatacaatgtgtgcaaaaggcatgaggaggtaggcgaataattacaattttgcagattagcactggtgataaatgatcagatggtcatgtacaggtagagatattggtgtgcaaaagagcagaaaagtaaataaataaaaacagtatggggatgaggtaggtgaaaatgggtgggctatttaccaatagactatgtacagctgcagcgatcggttagctgctcagatagctgatgtttgaagttggtgagggagataaaagtctccaacttcagcgatttttgcagttcgttccagtcacaggcagcagagtactgaaacgaaaggcggccaaatgaggtgttggctttagggatgatcagtgagatacacctgctggagcgagtgctacggatgggtgttgccatcgtgaccagtgaactgagataaggcggagctttacctagcaaggacttgtagatgacctggagccagtgggtctggcgacgaatatgtagcgagggccagccgactagagcatacaagtcgcagtggtgggtggtataaggtgctttggtgacaaaacggatggcactgtgatagactgcatccagtttgctgagtagagtgttggaagccattttgtagatgacatcgccgaagtcgaggatcggtaggatagtcagttttactagggtaagcttggc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1648601 True 863 lncRNA 0.45 1 32836650 32837512

Neighbor


gene id symbol gene type direction distance location
rbm34 LOC106564828 coding upstream 174888 32562173 ~ 32662021 (+)
LOC110493748 LOC106564832 coding upstream 276140 32499046 ~ 32560510 (+)
LOC110493746 LOC106564833 coding upstream 358074 32447495 ~ 32478576 (+)
LOC110493168 NA coding upstream 394858 32439735 ~ 32441792 (+)
LOC110495166 NA coding upstream 411388 32423006 ~ 32425262 (+)
strn LOC106564825 coding downstream 8708 32846220 ~ 32933183 (+)
LOC110493756 LOC106564824 coding downstream 137326 32974838 ~ 32984904 (+)
iip2 iip2 coding downstream 149164 32986676 ~ 32988014 (+)
LOC110493759 LOC106564822 coding downstream 198486 33035998 ~ 33037993 (+)
LOC110493760 LOC106564819 coding downstream 232244 33069756 ~ 33076669 (+)
G1440102 NA non-coding upstream 2514 32833820 ~ 32834136 (+)
G1440101 NA non-coding upstream 3688 32832699 ~ 32832962 (+)
G1440088 NA non-coding upstream 18218 32818205 ~ 32818432 (+)
G1440083 NA non-coding upstream 22443 32814007 ~ 32814207 (+)
G1440076 NA non-coding upstream 31413 32804992 ~ 32805237 (+)
G1440138 NA non-coding downstream 63064 32900576 ~ 32938762 (+)
G1440155 NA non-coding downstream 101831 32939343 ~ 32939760 (+)
G1440168 NA non-coding downstream 130464 32967976 ~ 32968176 (+)
G1440191 LOC106564821 non-coding downstream 173490 33011002 ~ 33016863 (+)
G1440200 NA non-coding downstream 187243 33024755 ~ 33057441 (+)
G1440066 NA other upstream 39218 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 69943 32712860 ~ 32766707 (+)
ero1b LOC106586106 other upstream 458342 32352949 ~ 32378308 (+)
LOC110493164 LOC106564854 other upstream 860429 31973440 ~ 31976221 (+)
G1440162 NA other downstream 114288 32951800 ~ 32956057 (+)
G1440890 LOC106564813 other downstream 686687 33524199 ~ 33524534 (+)
G1441315 NA other downstream 1138681 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 1452529 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 2331386 35120694 ~ 35184540 (+)

Expression



Co-expression Network