G1440785


Basic Information

Item Value
gene id G1440785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 33385277 ~ 33386802 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1649327
agcatagcagtgtgaacagacaacacagagttagtcaataacacagtagaaaaaaggggagtctatatacattgtgtgcaaaaggcatgagaaggtaggcgaataattacaattatgcagattaacactggagtgataaatgatcagatggttatgtacaggtagagatattggtgtgcaaaagagcagaaaagtaaataaataaaaacagtatggggatgaggtaggtgaaaatgggtgggctatttaccaatagactatgtacagctgcagcgatcggttagctgctcagatagcagatgtttgaagttggtgagggagataaaagtctccaacttcagcgatttttgcaattcattccagtcacaggcagcagagaactggaacgaaaggcggccaaatgaggtgttggctttagggatgatcagtgagatacacctgctggagcgcgtgctacggatgggtgttgccatcgtgaccagtgaactgagataaggcggagctttacctagcatggacttgtagatgacctggagccagtgggtctggcgacgaatatgtagcgagggccagccgactagagcatacaagtcgcagtggtgggtggtataaggtgctttagtgacaaaacggatggcactgtgataaactgcatccagtttgcagagttgagtgttggaagctattttgtagatgacatcgccgaagtcgaggatcggtaggatagtcagttttactagggtaagtttggcggcgtgagtgaaggaggctttgttgcggaatagaaagccgactcttgatttgattttcgattggagatgtttgatatgggtctggaaggagagtttacagtctagccagacacctaggtacttatagatgtccacatattcaaggtcggaaccatccagggtggtgatgctggtcaggcgtgcgggtgcaggcagcgatcggttgaaaagcatgcatttggttttactagcgtttaagagcagttggaggccacggaaggagtgttgtatggcattgaagctcgtttggaggttagatagcacagtgtccaaggacgggccggaagtatatagaatggtgtcgtctgcgtagaggtggatcagggaatcgcccgcagcatgagcaacatcattgatatatacagagaaaagagtcggcccgagaattgaaccctgtggcacccccatagagactgccagaggaccggacagcatgccctccgatttgacacactgaactctgtctgcaaagtaattggtgaaccaggcaaggcagtcatccgaaaaaccgaggctactgagtctgccgataagaatacggtgattgacagagtcgaaagccttggcaaggtctatgaagacggctgcacagtactgtcttttatcgatggcggttatgatatcgtttagtaccttgagcgtggctgaggtacacccgtgaccggctcggaaaccagattgcacagcggagaaggtacggtgggattcgagatggtcagtgacctgtttgttggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1649327 True 1526 lncRNA 0.48 1 33385277 33386802

Neighbor

gene id symbol gene type direction distance location
LOC110493762 LOC106564986 coding upstream 139312 33243976 ~ 33245965 (+)
LOC110493760 LOC106564819 coding upstream 308608 33069756 ~ 33076669 (+)
LOC110493759 LOC106564822 coding upstream 347284 33035998 ~ 33037993 (+)
iip2 iip2 coding upstream 397263 32986676 ~ 32988014 (+)
LOC110493756 LOC106564824 coding upstream 400373 32974838 ~ 32984904 (+)
LOC118940095 NA coding downstream 196573 33583355 ~ 33584984 (+)
LOC118940096 NA coding downstream 207474 33593813 ~ 33596307 (+)
LOC118940097 NA coding downstream 380433 33767235 ~ 33768659 (+)
LOC110493170 LOC108247247 coding downstream 436848 33823650 ~ 33825084 (+)
LOC110493766 LOC106564809 coding downstream 455536 33842338 ~ 33926454 (+)
G1440670 NA non-coding upstream 16106 33367254 ~ 33369171 (+)
G1440531 NA non-coding upstream 212717 33172216 ~ 33172560 (+)
G1440278 NA non-coding upstream 222146 33162873 ~ 33163131 (+)
G1440234 NA non-coding upstream 294651 33089140 ~ 33090626 (+)
G1440223 NA non-coding upstream 315821 33069226 ~ 33069456 (+)
G1440787 NA non-coding downstream 474 33387276 ~ 33387602 (+)
G1440789 NA non-coding downstream 2202 33389004 ~ 33389237 (+)
G1440887 NA non-coding downstream 129622 33516424 ~ 33517380 (+)
G1440891 NA non-coding downstream 138355 33525157 ~ 33525551 (+)
G1440892 NA non-coding downstream 138847 33525649 ~ 33525860 (+)
G1440162 NA other upstream 429220 32951800 ~ 32956057 (+)
G1440066 NA other upstream 587845 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 618570 32712860 ~ 32766707 (+)
rbm34 LOC106564828 other upstream 774936 32562173 ~ 32662021 (+)
ero1b LOC106586106 other upstream 1006969 32352949 ~ 32378308 (+)
G1440890 LOC106564813 other downstream 137397 33524199 ~ 33524534 (+)
G1441315 NA other downstream 589391 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 903239 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 1782096 35120694 ~ 35184540 (+)
G1443221 NA other downstream 2287162 35673964 ~ 35744642 (+)

Expression


Co-expression Network