Gene
RNA
| Item | Value |
|---|---|
| gene id | G1440887 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 33516424 ~ 33517380 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1649433 | True | 872 | lncRNA | 0.40 | 2 | 33516424 | 33517380 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493762 | LOC106564986 | coding | upstream | 270459 | 33243976 ~ 33245965 (+) |
| LOC110493760 | LOC106564819 | coding | upstream | 439755 | 33069756 ~ 33076669 (+) |
| LOC110493759 | LOC106564822 | coding | upstream | 478431 | 33035998 ~ 33037993 (+) |
| iip2 | iip2 | coding | upstream | 528410 | 32986676 ~ 32988014 (+) |
| LOC110493756 | LOC106564824 | coding | upstream | 531520 | 32974838 ~ 32984904 (+) |
| LOC118940095 | NA | coding | downstream | 65995 | 33583355 ~ 33584984 (+) |
| LOC118940096 | NA | coding | downstream | 76896 | 33593813 ~ 33596307 (+) |
| LOC118940097 | NA | coding | downstream | 249855 | 33767235 ~ 33768659 (+) |
| LOC110493170 | LOC108247247 | coding | downstream | 306270 | 33823650 ~ 33825084 (+) |
| LOC110493766 | LOC106564809 | coding | downstream | 324958 | 33842338 ~ 33926454 (+) |
| G1440789 | NA | non-coding | upstream | 127187 | 33389004 ~ 33389237 (+) |
| G1440787 | NA | non-coding | upstream | 128822 | 33387276 ~ 33387602 (+) |
| G1440785 | NA | non-coding | upstream | 129622 | 33385277 ~ 33386802 (+) |
| G1440670 | NA | non-coding | upstream | 147253 | 33367254 ~ 33369171 (+) |
| G1440531 | NA | non-coding | upstream | 343864 | 33172216 ~ 33172560 (+) |
| G1440891 | NA | non-coding | downstream | 7777 | 33525157 ~ 33525551 (+) |
| G1440892 | NA | non-coding | downstream | 8269 | 33525649 ~ 33525860 (+) |
| G1440901 | LOC106564813 | non-coding | downstream | 18508 | 33535888 ~ 33536196 (+) |
| G1440904 | NA | non-coding | downstream | 22054 | 33539434 ~ 33539718 (+) |
| G1440162 | NA | other | upstream | 560367 | 32951800 ~ 32956057 (+) |
| G1440066 | NA | other | upstream | 718992 | 32797098 ~ 32797432 (+) |
| G1439962 | LOC106564826 | other | upstream | 749717 | 32712860 ~ 32766707 (+) |
| rbm34 | LOC106564828 | other | upstream | 906083 | 32562173 ~ 32662021 (+) |
| ero1b | LOC106586106 | other | upstream | 1138116 | 32352949 ~ 32378308 (+) |
| G1440890 | LOC106564813 | other | downstream | 6819 | 33524199 ~ 33524534 (+) |
| G1441315 | NA | other | downstream | 458813 | 33976193 ~ 33976475 (+) |
| LOC110493778 | LOC106564798 | other | downstream | 772661 | 34290017 ~ 34317682 (+) |
| LOC110493802 | LOC106564779 | other | downstream | 1651518 | 35120694 ~ 35184540 (+) |
| G1443221 | NA | other | downstream | 2156584 | 35673964 ~ 35744642 (+) |
