G1440892


Basic Information

Item Value
gene id G1440892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 33525649 ~ 33525860 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1649438
GCCAGGTAGGCCCTAAGAAAGTCTTGCAGTTGCTGAAATTGTTGGAGGTTGCATTGGTTCTCTGCCATGCTCAAGCCCAACTCCTCCCAAGCGTGCTGGGTCGCATGGATGTCCTCCCCCAAAGCCCCTGGCATTTCAGGTAGGAGGACCTGTAGTCGCAAAGCcagtccctccatctcttccacctcctcttttaTGACCTGATAGTCCCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1649438 True 212 lncRNA 0.54 1 33525649 33525860

Neighbor

gene id symbol gene type direction distance location
LOC110493762 LOC106564986 coding upstream 279684 33243976 ~ 33245965 (+)
LOC110493760 LOC106564819 coding upstream 448980 33069756 ~ 33076669 (+)
LOC110493759 LOC106564822 coding upstream 487656 33035998 ~ 33037993 (+)
iip2 iip2 coding upstream 537635 32986676 ~ 32988014 (+)
LOC110493756 LOC106564824 coding upstream 540745 32974838 ~ 32984904 (+)
LOC118940095 NA coding downstream 57515 33583355 ~ 33584984 (+)
LOC118940096 NA coding downstream 68416 33593813 ~ 33596307 (+)
LOC118940097 NA coding downstream 241375 33767235 ~ 33768659 (+)
LOC110493170 LOC108247247 coding downstream 297790 33823650 ~ 33825084 (+)
LOC110493766 LOC106564809 coding downstream 316478 33842338 ~ 33926454 (+)
G1440891 NA non-coding upstream 98 33525157 ~ 33525551 (+)
G1440887 NA non-coding upstream 8269 33516424 ~ 33517380 (+)
G1440789 NA non-coding upstream 136412 33389004 ~ 33389237 (+)
G1440787 NA non-coding upstream 138047 33387276 ~ 33387602 (+)
G1440785 NA non-coding upstream 138847 33385277 ~ 33386802 (+)
G1440901 LOC106564813 non-coding downstream 10028 33535888 ~ 33536196 (+)
G1440904 NA non-coding downstream 13574 33539434 ~ 33539718 (+)
G1440966 NA non-coding downstream 104061 33629921 ~ 33640039 (+)
G1440890 LOC106564813 other upstream 1115 33524199 ~ 33524534 (+)
G1440162 NA other upstream 569592 32951800 ~ 32956057 (+)
G1440066 NA other upstream 728217 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 758942 32712860 ~ 32766707 (+)
rbm34 LOC106564828 other upstream 915308 32562173 ~ 32662021 (+)
G1441315 NA other downstream 450333 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 764181 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 1643038 35120694 ~ 35184540 (+)
G1443221 NA other downstream 2148104 35673964 ~ 35744642 (+)
G1443251 NA other downstream 2221012 35746872 ~ 35751790 (+)

Expression


Co-expression Network