XLOC_003375 (CR769769.1)


Basic Information

Item Value
gene id XLOC_003375
gene name CR769769.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 17137848 ~ 17141887 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006611
acacattctcactcccaactcgtcatatactgacgcttggtcaggaaccctcggcgtaggttattgacgcacagggtacccctttagcgtcacatttagacgtgcagggattccctatagaatctgtaACGTTACCTGAGCCTGAAgcgtcatagggagacgctggaggctcgtataattaccaatagatgtcaacgcactttttaaaacctgatttacgcctattatcgcagttttcttcttttaaaaatatgtaatttttattttgttcatgaaaagcgtctgtaaactgggtcgaaactactgtatgaataaacttcggtccacgtgacatcccttcacggtgagtttaacgccgctctgctattggtcaaactgcatcaacggtgagttctcagatgagttcaactgtcaacattaaatagtaTGGTAATGctgcataatgtatttttattggagattagttggtgtttataaatattttatcattaactttatatttaatgagtgaaaatatattcggttgtccagtttaggttaactataaaactatactactaataaaactttgattcattcatattatttattatttttttacttaaaaaatattacatttcaagtactaagtttaaaaatgtttttggctgatctttttcattttaaattattcattgaagttggggtcattgtatgtggcgatctattttttacagtctatgctcgctatcccaaggttcattgcgatcccaaggttcactgcggttttccacaagCCTGTTTCTGCCTATCACCATGAGTGATTCCTTGATACTCATATTTATCATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAGGGTGAAATGGAGTGAGGCATACAAGGATATGTGTGGTTTTACTCTTGGGAAGGAGGTTGAACAGTGCAATATTTCTTCTATAGGATTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGACCACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCATGAAACTGGCAGTGACCGGAAACCAGTTAGAAGACTTTGGTCT
>TCONS_00006612
attctcactcccaactcgtcatatactgacgcttggtcaggaaccctcggcgtaggttattgacgcacagggtacccctttagcgtcacatttagacgtgcagggattccctatagaatctgtaACGTTACCTGAGCCTGAAgcgtcatagggagacgctggaggctcgtataattaccaatagatgtcaacgcactttttaaaacctgatttacgcctattatcgcagttttcttcttttaaaaatatgtaatttttattttgttcatgaaaagcgtctgtaaactgggtcgaaactactgtatgaataaacttcggtccacgtgacatcccttcacgtctatgctcgctatcccaaggttcattgcgatcccaaggttcactgcggttttccacaagCTCATAGGAACTCCAATCTTCCCAACTGTGAGAGGGCCTTGCTCCAGTGACTGTTGGTGAAATGGAGTGAGGCATACAAGGATATGTGTGGTTTTACTCTTGGGAAGGAGGTTGAACAGTGCAATATTTCTTCTATAGGATTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGACCACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCATGAAACTGGCAGTGACCGG
>TCONS_00006613
attctcactcccaactcgtcatatactgacgcttggtcaggaaccctcggcgtaggttattgacgcacagggtacccctttagcgtcacatttagacgtgcagggattccctatagaatctgtaACGTTACCTGAGCCTGAAgcgtcatagggagacgctggaggctcgtataattaccaatagatgtcaacgcactttttaaaacctgatttacgcctattatcgcagttttcttcttttaaaaatatgtaatttttattttgttcatgaaaagcgtctgtaaactgggtcgaaactactgtatgaataaacttcggtccacgtgacatcccttcacgtctatgctcgctatcccaaggttcattgcgatcccaaggttcactgcggttttccacaagCCTGTTTCTGCCTATCACCATGAGTGATTCCTTGATACTCATATTTATCATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAGGCTCATAGGAACTCCAATCTTCCCAACTGTGAGAGGGCCTTGCTCCAGTGACTGTTGGTGAAATGGAGTGAGGCATACAAGGATATGTGTGGTTTTACTCTTGGGAAGGAGGTTGAACAGTGCAATATTTCTTCTATAGGATTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGACCACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCATGAAACTGGCAGTGACCGGAAACCAGTTAGAAGACTTTGGTCTGTGACGTAGAGGAGTGGGCAGACGcagaagcAAAGACGACAAACAACAGAAGTGATATGGATGTCTTCGTCATATGGCATGactcTGCTGACCCAGCAACAAAGAGGAGGGTGTTCAACATCATCCTGCTAGTCAGGATTCTTCAGAAGCAGTGGATTCTTGTGGCAGAGATGGCCAACCACTATAAATACATTTCAACTCATCCTGGTTCCTTCAAAGAACTTTCCTGCTTGTTTGCTACTGAAaaattcgacatgtggcctaaacgaagaggggttaaaaggtctatggatcatcattctcagaaagcaacaaaataactgagaaataaacaacaatacgatggtgcaatctagagacctacaaggtacctgcaagttttggctggagcagagaacatacatattttaaataaagctccagctgatgagtttgacattgactgtggattttcttttactgtaatccagaagaggatgaccttaaccctgaatctaaagcatgtaataaaatctgtaaaaataaaataaaattttcatcaTCTATAAC
>TCONS_00006614
tttttttacttaaaaaatattacatttcaagtactaagtttaaaaatgtttttggctgatctttttcattttaaattattcattgaagttggggtcattgtatgtggcgatctattttttacagtctatgctcgctatcccaaggttcattgcgatcccaaggttcactgcggttttccacaagCCTGTTTCTGCCTATCACCATGAGTGATTCCTTGATACTCATATTTATCATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAGGGATTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGACCACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCATGAAACTGGCAGTGACCGGAAACCAGTTAGAAGACTTTGGTCTGTGACGTAGAGGAGTGGGCAGACGcagaagcAAAGACGACAAACAACAGAAGTGATATGGATGTCTTCGTCATATGGCATGactcTGCTGACCCAGCAACAAAGAGGAGGGTGTTCAACATCATCCTGCTAGTCAGGATTCTTCAGAAGCAGTGGATTCTTGTGGCAGAGATGGCCAACCACTATAAATACATTTCAACTCATCCTGGTTCCTTCAAAGAACTTTCCTGCTTGTTTGCTACTGAAaagtatattcgacatgtggcctaaacgaagaggggttaaaaggtctatggatcatcattctcagaaagcaacaaaataactgagaaataaacaacaatacgatggtgcaatctagagacctacaaggtacctgcaagttttggctggagcagagaacatacatattttaaataaagctccagctgatgagtttgacattgactgtggattttcttttactgtaatccagaagaggatgaccttaaccctgaatctaaagcatgtaataaaatctgtaaaaataaaataaaattttcatcaTCT
>TCONS_00006615
cattgtatgtggcgatctattttttacagtctatgctcgctatcccaaggttcattgcgatcccaaggttcactgcggttttccacaagCCTGTTTCTGCCTATCACCATGAGTGATTCCTTGATACTCATATTTATCATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAGGCTCATAGGAACTCCAATCTTCCCAACTGTGAGAGGGCCTTGCTCCAGTGACTGATTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGACCACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCATGAAACTGGCAGTGACCGGAAACCAGTTAGAAGACTTTGGTCTGTGACGTAGAGGAGTGGGCAGACGGTGAggaaattcttattaatattacatgtagtcatgaaaaattgtaagtgttactattattgtcatttttttcagtagcagaagcAAAGACGACAAACAACAGAAGTGATATGGATGTCTTCGTCATATGGCATGactcTGCTGACCCAGCAACAAAGAGGAGGGTGTTCAACATCATCCTGCTAGTCAGGATTCTTCAGAAGCAGT
>TCONS_00006616
cattgtatgtggcgatctattttttacagtctatgctcgctatcccaaggttcattgcgatcccaaggttcactgcggttttccacaagCCTGTTTCTGCCTATCACCATGAGTGATTCCTTGATACTCATATTTATCATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAGGCTCATAGGAACTCCAATCTTCCCAACTGTGAGAGGGCCTTGCTCCAGTGACTGTGAAATGGAGTGAGGCATACAAGGATATGTGTGGTTTTACTCTTGGGAAGGAGGTTGAACAGTGCAATATTTCTTCTATAGGATTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGACCACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCATGAAACTGGCAGTGACCGGAAACCAGTTAGAAGACTTTGGTCTGTGACGTAGAGGAGTGGGCAGACGGTGAggaaattcttattaatattacatgtagtcatgaaaaattgtaagtgttactattattgtcatttttttcagtagcagaagcAAAGACGACAAACAACAGAAGTGATATGGATGTCTTCGTCATATGGCATGactcTGCTGACCCAGCAACAAAGAGGAGGGTGTTCAACATCATCCTGCTAGTCAGGATTCTTCAGAAGCAGTGGATTCTTGTGGCAGAGATGGCCAACCACTATAAATACATTTCAACTCATCCTGGTTCCTTCAAAGAACTTTCCTGCTTGTTTGCTACTGAAaagtatattcgacatgtggcctaaacgaagaggggttaaaaggtctatggatcatcattctcagaaagcaacaa
>TCONS_00006617
acagtctatgctcgctatcccaaggttcattgcgatcccaaggttcactgcggttttccacaagCCTGTTTCTGCCTATCACCATGAGTGATTCCTTGATACTCATATTTATCATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAGGGTGAAATGGAGTGAGGCATACAAGGATATGTGTGGTTTTACTCTTGGGAAGGAGGTTGAACAGTGCAATATTTCTTCTATAGGA
>TCONS_00006618
tcgctatcccaaggttcattgcgatcccaaggttcactgcggttttccacaagCCTGTTTCTGCCTATCACCATGAGTGATTCCTTGATACTCATATTTATCATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAGGGTTAGTGAAGTTTTTCATTccatgtatattaaatatctacattgtttaggcatatatgattgtatgagataaaatgcatttattctttcaCTTCTATTGTAATAACAGAGAGGAACGCAttagttttactattactattgtttatgaaaaacattataaactacagtataagctcacaaaatattgtggcctaactgtttaaaactatttgttctgggtgttgatagtggccaaccattttttttctttttcagaaagtattttgttttgtcgGATTTTATGACACCTTAAAGGCCATCAACTGTCCACATTGCGGTTTAGGAAATTAAACAACTAATGCTGCTTGTCTACTAGTCTTAGGATAAGTTagaattgttataaatgttaattttttgttgtttttatctggtaCAGCTCATAGGAACTCCAATCTTCCCAACTGTGAGAGGGCCTTGCTCCAGTGACTGTTGGTGTGTACTTTAATGTTTCCATTAGTCCCTGTATCTGTAGATCTAGGTGACAGTGGGCTAgagtaaaaatttgtttttatttaaactaaggcatactgatggccttttttatctcagatttggtcatgcaagtattaatatatcctaaaatatttttatattctttccattggtggaaaagagtttggtataattatttttaatagactgccaagatctcagcagacattt
>TCONS_00008580
gttcattgcgatcccaaggttcactgcggttttccacaaggtacgtaaaaagtaaataaagacgatttgttgataaagcatgtactgtaaactagcgacgttGTCTAATTACATcaggttcatttattaaaaacatatttttctcacatataacgttggtcatgcattaaaacaatatataaattttaagataaggaacagtgttaccagattgttgttttccacaatagaattcgtgcaaaatctttatatgatatgcaatatgcaactctaataatacaaatgtattcgtaattgtttcaatattaaagaacatcaagtgtttccaaaggttaattgtaaaaacaattattttccatgcctttaaAGGAAAAAAGGCAGAGCACCCGTGCCCGTCTgagcacatttttaatttaattttatttttattttaatctaccacacacacacacatatgtatgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacaggtgtaaATTATAAGGTATTCACTGTtcagatatgaatatttttttttgttcttttcaggttctttagatttctttaaaaatccaattttgttttctaataagcaAAAAGTAAAGCCACTTTACCCATGTCTGTATGTTAAATTGAGCTTGtctttctctctatctctgttaacacatttgtatttgtttgattaattcttGTGTCTTTCAGCCTGTTTCTGCCTATCACCATGAGTGATTCCTTGATACTCATATTTATCATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAGGGTTAGTGAAGTTTTTCATTccatgtatattaaatatctacattgtttaggcatatatgattgtatgagataaaatgcatttattctttcaCTTCTATTGTAATAACAGAGAGGAACGCAttagttttactattactattgtttatgaaaaacattataaactacagtataagctcacaaaatattgtggcctaactgtttaaaactatttgttctgggtgttgatagtggccaaccattttttttctttttcagaaagtattttgttttgtcgGATTTTATGACACCTTAAAGGCCATCAACTGTCCACATTGCGGTTTAGGAAATTAAACAACTAATGCTGCTTGTCTACTAGTCTTAGGATAAGTTagaattgttataaatgttaattttttgttgtttttatctggtaCAGCTCATAGGAACTCCAATCTTCCCAACTGTGAGAGGGCCTTGCTCCAGTGACTGTTGGTGTGTACTTTAATGTTTCCATTAGTCCCTGTATCTGTAGATCTAGGTGACAGTGGGCTAgagtaaaaatttgtttttatttaaactaaggcatactgatggccttttttatctcagatttggtcatgcaagtattaatatatcctaaaatatttttatattctttccattggtggaaaagagtttggtataattatttttaatagactgccaagatctcagcagacatttttctgagaTACTCTTGAGTGGGAGTCTGTGCAATACAAGGTGGATAGTATTTGCAAGGAAGAGCCCTTCATCTGTCCTGCTTCCACACTAGATATACTGCCAATTTAAGTAGATGTGAACCATAAGCATAACCATTTCAAGAATGCACAaggtactttaaactgtatgtgttgaaactaaattaacaagaaaacagtTCTGTGATGTTCACCTAGTAAAATTAGATTAGAAGATAATATTTTGAAGGTTTGTTTACAGCTAAGGATTAAGGATTGACAGGAAGATTTGTGGACTACATCAACTAATGACACTACCTCCAAAGAGTTGCAAAAAGCTGTCCAAAGTTTCAGCACCATCTTTAAGCCCATGATTTTAGTGTGTTTCATGCCTAAGCACATGAGTTTATATCTGAGATAGATGAACTATGTGATTATCTTAAACTGATCTACAAGTAAATGCCAAAACTTATTGGTTtacttatttgcttgtttgtttgtttgtttgtttgtttgtttttgtatatgtTAACCAGGTGAAATGGAGTGAGGCATACAAGGATATGTGTGGTTTTACTCTTGGGAAGGAGGTTGAACAGTGCAATATTTCTTCTATAGGATTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGGTAACGATATCCAGTagaatttgtttttgttgttctgTAACCTATTTAAATAGTGTTGTGATTTTTGATTGCTTATCACTGTAGACCACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCATGAAACTGGCAGTGACCGGAAACCAGTTAGAAGACTTTGGTCTGTGACGTAGAGGAGTGGGCAGACGGTGAggaaattcttattaatattacatgtagtcatgaaaaattgtaagtgttactattattgtcatttttttcagtagcagaagcAAAGACGACAAACAACAGAAGTGATATGGATGTCTTCGTCATATGGCATGGTATGTACACTAGACTTCTGTCAGTGTTGATTCTTTAAAAGTTGATGTATAATCCTTGTTGTACAactttctttttataaatatatttcagactcTGCTGACCCAGCAACAAAGAGGAGGGTGTTCAACATCATCCTGCTAGTCAGGATTCTTCAGAAGCAGTGGATTCTTGTGGCAGAGATGGCCAACCACTATAAATACATTTCAACTCATCCTGGTTCCTTCAAAGAACTTTCCTGCTTGTTTGCTACTGAAaagtatgtatttgtattatttggcacagacataagcataaggttacccagtccaaatgatattaatatatttttatgttgttgtgttcttttaagattcgacatgtggcctaaacgaagaggggttaaaaggtctatggatcatcattctcagaaagcaacaaaataactgagaaataaacaacaatacgatggtgcaatctagagacctacaaggtacctgcaagttttggctggagcagagaacatacatattttaaataaagctccagc
>TCONS_00006619
ATAAGGTATTCACTGTtcagatatgaatatttttttttgttcttttcaggttctttagatttctttaaaaatccaattttgttttctaataagcaAAAAGTAAAGCCACTTTACCCATGTCTGTATGTTAAATTGAGCTTGtctttctctctatctctgttaacacatttgtatttgtttgattaattcttGTGTCTTTCAGCCTGTTTCTGCCTATCACCATGAGTGATTCCTTGATACTCATATTTATCATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAGGGTGAAATGGAGTGAGGCATACAAGGATATGTGTGGTTTTACTCTTGGGAAGGAGGTTGAACAGTGCAATATTTCTTCTATAGGATTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGACCACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCATGAAACTGGCAGTGACCGGAAACCAGTTAGAAGACTTTGGTCTGTGACGTAGAGGAGTGGGCAGACGcagaagcAAAGACGACAAACAACAGAAGTGATATGGATGTCTTCGTCATATGGCATGactcTGCTGACCCAGCAACAAAGAGGAGG
>TCONS_00006620
taattcttGTGTCTTTCAGCCTGTTTCTGCCTATCACCATGAGTGATTCCTTGATACTCATATTTATCATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAGGCTCATAGGAACTCCAATCTTCCCAACTGTGAGAGGGCCTTGCTCCAGTGACTGTTGGATTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGACCACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCATGAAACTGGCAGTGACCGGAAACCAGTTAGAAGACTTTGGTCTGTGACGTAGAGGAGTGGGCAGACGcagaagcAAAGACGACAAACAACAGAAGTGATATGGATGTCTTCGTCATATGGCATGactcTGCTGACCCAGCAACAAAGAGGAGGGTGTTCAACATCATCCTGCTAGTCAGGATTCTTCAGAAGCAGTGGATTCTTGTGGCAGAGATGGCCAACCACTATAAATACATTTCAACTCATCCTGGTTCCTTCAAAGAACTTTCCTGCTTGTTTGCTACTGAAaaattcgacatgtggcctaaacgaagaggggttaaaaggtctatggatcatcattctcagaaagcaacaaaataactgagaaataaacaacaatacgatggtgcaatctagagacctacaaggtacctgc

Function

GO:

id name namespace
GO:0019219 regulation of nucleobase-containing compound metabolic process biological_process
GO:0016070 RNA metabolic process biological_process
GO:0080090 regulation of primary metabolic process biological_process
GO:0018130 heterocycle biosynthetic process biological_process
GO:0006351 transcription, DNA-templated biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0051171 regulation of nitrogen compound metabolic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0043049 otic placode formation biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0042471 ear morphogenesis biological_process
GO:0042472 inner ear morphogenesis biological_process
GO:0009889 regulation of biosynthetic process biological_process
GO:0097659 nucleic acid-templated transcription biological_process
GO:0031323 regulation of cellular metabolic process biological_process
GO:0031326 regulation of cellular biosynthetic process biological_process
GO:0072175 epithelial tube formation biological_process
GO:0051252 regulation of RNA metabolic process biological_process
GO:1903506 regulation of nucleic acid-templated transcription biological_process
GO:1901362 organic cyclic compound biosynthetic process biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0060255 regulation of macromolecule metabolic process biological_process
GO:0035148 tube formation biological_process
GO:0060788 ectodermal placode formation biological_process
GO:2001141 regulation of RNA biosynthetic process biological_process
GO:0032774 RNA biosynthetic process biological_process
GO:0019438 aromatic compound biosynthetic process biological_process
GO:0007417 central nervous system development biological_process
GO:0010556 regulation of macromolecule biosynthetic process biological_process
GO:0034654 nucleobase-containing compound biosynthetic process biological_process
GO:0030902 hindbrain development biological_process
GO:2000112 regulation of cellular macromolecule biosynthetic process biological_process
GO:0030916 otic vesicle formation biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003690 double-stranded DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000976 transcription regulatory region sequence-specific DNA binding molecular_function
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function
GO:0000987 cis-regulatory region sequence-specific DNA binding molecular_function
GO:0140110 transcription regulator activity molecular_function
GO:0001067 regulatory region nucleic acid binding molecular_function
GO:1990837 sequence-specific double-stranded DNA binding molecular_function

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092254

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006611 False 1197 lncRNA 0.38 4 17137848 17141076
TCONS_00006612 False 700 lncRNA 0.44 5 17137852 17141052
TCONS_00006613 False 1425 lncRNA 0.42 9 17137852 17141887
TCONS_00006614 False 1071 lncRNA 0.39 7 17138440 17141882
TCONS_00006615 False 711 lncRNA 0.43 6 17138535 17141398
TCONS_00006616 False 959 lncRNA 0.42 7 17138535 17141653
TCONS_00006617 False 300 lncRNA 0.43 3 17138560 17140807
TCONS_00006618 False 906 lncRNA 0.34 2 17138571 17140191
TCONS_00008580 False 3179 lncRNA 0.33 1 17138584 17141762
TCONS_00006619 False 733 lncRNA 0.39 5 17139137 17141355
TCONS_00006620 True 789 lncRNA 0.43 7 17139320 17141713

Neighbor

gene id symbol gene type direction distance location
XLOC_003373 kbtbd8 coding upstream 549804 16574625 ~ 16588044 (+)
XLOC_003372 slc25a26 coding upstream 813273 16216909 ~ 16324575 (+)
XLOC_003371 tada3l coding upstream 958658 16152316 ~ 16179190 (+)
XLOC_003370 pimr204 coding upstream 996312 16137302 ~ 16141536 (+)
XLOC_003368 ctbs coding upstream 1054240 16070438 ~ 16083608 (+)
XLOC_003376 CR631124.1 coding downstream 186678 17328565 ~ 17328681 (+)
XLOC_003377 BX571952.1 coding downstream 298704 17440591 ~ 17513632 (+)
XLOC_003378 CR589944.3 coding downstream 777256 17919143 ~ 17920013 (+)
XLOC_003379 NA coding downstream 788386 17930273 ~ 17932158 (+)
XLOC_003380 NA coding downstream 809676 17951563 ~ 17952558 (+)
XLOC_003369 CR854846.2 misc upstream 1014766 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 4425852 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 4443585 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 4452249 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 4457820 12679732 ~ 12680028 (+)
XLOC_003363 FP016142.2 non-coding upstream 1336452 15799383 ~ 15801396 (+)
XLOC_003362 FP016142.6 non-coding upstream 1358597 15776072 ~ 15779251 (+)
XLOC_003359 NA non-coding upstream 1796435 15339344 ~ 15341413 (+)
XLOC_003358 CR550302.2 non-coding upstream 2119324 15017185 ~ 15018524 (+)

Expression


Co-expression Network