G1440904


Basic Information

Item Value
gene id G1440904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 33539434 ~ 33539718 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1649450
CCCTTTGAGAGGGTTCTGTTCCTCTTTGATGTCCTTTCCTATGATCCTCTGGGCCTCATGTTCCGGATCTCTGGTTTGACTCAGTGGGCCAGGTTCATCACAGGAGAAGTCTATGGCAAGGGTGGTGGGCAAATCTGGCCACTCGCTCCTGCATGGCAAAACATTATGGGTTACTTATTGTAACACTGGTTCTATCAATGATAGTGACCCTACCCTACCACATCCGTAAGGCCAGTTGACACTCAGTGCTAGTTTCATTGGTAATGAAATAGAATGGTTCATGTg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1649450 True 285 lncRNA 0.47 1 33539434 33539718

Neighbor

gene id symbol gene type direction distance location
LOC110493762 LOC106564986 coding upstream 293469 33243976 ~ 33245965 (+)
LOC110493760 LOC106564819 coding upstream 462765 33069756 ~ 33076669 (+)
LOC110493759 LOC106564822 coding upstream 501441 33035998 ~ 33037993 (+)
iip2 iip2 coding upstream 551420 32986676 ~ 32988014 (+)
LOC110493756 LOC106564824 coding upstream 554530 32974838 ~ 32984904 (+)
LOC118940095 NA coding downstream 43657 33583355 ~ 33584984 (+)
LOC118940096 NA coding downstream 54558 33593813 ~ 33596307 (+)
LOC118940097 NA coding downstream 227517 33767235 ~ 33768659 (+)
LOC110493170 LOC108247247 coding downstream 283932 33823650 ~ 33825084 (+)
LOC110493766 LOC106564809 coding downstream 302620 33842338 ~ 33926454 (+)
G1440901 LOC106564813 non-coding upstream 3238 33535888 ~ 33536196 (+)
G1440892 NA non-coding upstream 13574 33525649 ~ 33525860 (+)
G1440891 NA non-coding upstream 13883 33525157 ~ 33525551 (+)
G1440887 NA non-coding upstream 22054 33516424 ~ 33517380 (+)
G1440789 NA non-coding upstream 150197 33389004 ~ 33389237 (+)
G1440966 NA non-coding downstream 90203 33629921 ~ 33640039 (+)
G1440967 NA non-coding downstream 93872 33633590 ~ 33641456 (+)
G1441004 NA non-coding downstream 184359 33724077 ~ 33724950 (+)
G1440890 LOC106564813 other upstream 14900 33524199 ~ 33524534 (+)
G1440162 NA other upstream 583377 32951800 ~ 32956057 (+)
G1440066 NA other upstream 742002 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 772727 32712860 ~ 32766707 (+)
rbm34 LOC106564828 other upstream 929093 32562173 ~ 32662021 (+)
G1441315 NA other downstream 436475 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 750323 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 1629180 35120694 ~ 35184540 (+)
G1443221 NA other downstream 2134246 35673964 ~ 35744642 (+)
G1443251 NA other downstream 2207154 35746872 ~ 35751790 (+)

Expression


Co-expression Network