G1441203


Basic Information

Item Value
gene id G1441203
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 33771762 ~ 33772286 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1649821
AACTAACTTTAATCCACATATTTTTGGGTGAGGAGTAGACCAGAATGGAGATGCACGGATCTTCATAAGGAATCAGCTATCCCCTCTGATGTAATTGCTAACATTACTTCAATCATGTAATGCTCAATGAGTGaataggtgtggagtcaggcgcagagagcaaaggatgcgggaaaaacacgctttaatgtccagaATAAATCACAGGAACAAAAATAGTATACCAAACCAGGTAATACTACAGAACAAAAGTAACCTATAGTGAAAAATAAAAGGACAGCGAGAAACCCAAATGAAAACACTAACCACTCTAACACATACAgatgaacaagcccgcacaaacagaagcgggctgaacgaacttaaataaccccaccctaacaaccaaacaagaaacaggtgaaaccaattagacaaaaccaaacgaacacagaacaaaggatcggtggcagctagtagaccggcgacgacgaccgccgagcgccacccgaacaagaaggggagtcaccttcggtaatattcgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1649821 True 525 lncRNA 0.43 1 33771762 33772286

Neighbor

gene id symbol gene type direction distance location
LOC118940097 NA coding upstream 3103 33767235 ~ 33768659 (+)
LOC118940096 NA coding upstream 175460 33593813 ~ 33596307 (+)
LOC118940095 NA coding upstream 187082 33583355 ~ 33584984 (+)
LOC110493762 LOC106564986 coding upstream 525797 33243976 ~ 33245965 (+)
LOC110493760 LOC106564819 coding upstream 695093 33069756 ~ 33076669 (+)
LOC110493170 LOC108247247 coding downstream 51364 33823650 ~ 33825084 (+)
LOC110493766 LOC106564809 coding downstream 70052 33842338 ~ 33926454 (+)
LOC110493767 LOC106564808 coding downstream 165248 33937534 ~ 33970100 (+)
LOC110493768 hebp1 coding downstream 211374 33983660 ~ 33995716 (+)
LOC110493769 LOC106564807 coding downstream 223882 33996168 ~ 34034123 (+)
G1441004 NA non-coding upstream 46812 33724077 ~ 33724950 (+)
G1440967 NA non-coding upstream 130306 33633590 ~ 33641456 (+)
G1440966 NA non-coding upstream 131723 33629921 ~ 33640039 (+)
G1441204 NA non-coding downstream 993 33773279 ~ 33773494 (+)
G1441216 NA non-coding downstream 17055 33789341 ~ 33789580 (+)
G1441218 NA non-coding downstream 18377 33790663 ~ 33790891 (+)
G1441224 NA non-coding downstream 26147 33798433 ~ 33798668 (+)
G1441225 NA non-coding downstream 26689 33798975 ~ 33800396 (+)
G1440890 LOC106564813 other upstream 247228 33524199 ~ 33524534 (+)
G1440162 NA other upstream 815705 32951800 ~ 32956057 (+)
G1440066 NA other upstream 974330 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 1005055 32712860 ~ 32766707 (+)
rbm34 LOC106564828 other upstream 1161421 32562173 ~ 32662021 (+)
G1441315 NA other downstream 203907 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 517755 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 1396612 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1901678 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1974586 35746872 ~ 35751790 (+)

Expression


Co-expression Network