G1441224


Basic Information

Item Value
gene id G1441224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 33798433 ~ 33798668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1649846
cttctctgcagatcctctcaagctctgtcatgttggatcaggagtgtcgctgcacagctattttcaggcctctccagagatgttatatcgggttcaagtccgggctctggttgggccacacaaggacattcagagacttgttccgaagccactcctgcgttgtcttggatgtgtgcttagcgttgttgacctgttggaaggtaaacatttgcaaacgtcttccatttaagaatgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1649846 True 236 lncRNA 0.48 1 33798433 33798668

Neighbor

gene id symbol gene type direction distance location
LOC118940097 NA coding upstream 29774 33767235 ~ 33768659 (+)
LOC118940096 NA coding upstream 202131 33593813 ~ 33596307 (+)
LOC118940095 NA coding upstream 213753 33583355 ~ 33584984 (+)
LOC110493762 LOC106564986 coding upstream 552468 33243976 ~ 33245965 (+)
LOC110493760 LOC106564819 coding upstream 721764 33069756 ~ 33076669 (+)
LOC110493170 LOC108247247 coding downstream 24982 33823650 ~ 33825084 (+)
LOC110493766 LOC106564809 coding downstream 43670 33842338 ~ 33926454 (+)
LOC110493767 LOC106564808 coding downstream 138866 33937534 ~ 33970100 (+)
LOC110493768 hebp1 coding downstream 184992 33983660 ~ 33995716 (+)
LOC110493769 LOC106564807 coding downstream 197500 33996168 ~ 34034123 (+)
G1441218 NA non-coding upstream 7542 33790663 ~ 33790891 (+)
G1441216 NA non-coding upstream 8853 33789341 ~ 33789580 (+)
G1441204 NA non-coding upstream 24939 33773279 ~ 33773494 (+)
G1441203 NA non-coding upstream 26147 33771762 ~ 33772286 (+)
G1441004 NA non-coding upstream 73483 33724077 ~ 33724950 (+)
G1441225 NA non-coding downstream 307 33798975 ~ 33800396 (+)
G1441188 NA non-coding downstream 83844 33882512 ~ 33931224 (+)
G1441281 NA non-coding downstream 84197 33882865 ~ 33883147 (+)
G1441286 NA non-coding downstream 92075 33890743 ~ 33891492 (+)
G1441536 NA non-coding downstream 239272 34037940 ~ 34038151 (+)
G1440890 LOC106564813 other upstream 273899 33524199 ~ 33524534 (+)
G1440162 NA other upstream 842376 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1001001 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 1031726 32712860 ~ 32766707 (+)
rbm34 LOC106564828 other upstream 1188092 32562173 ~ 32662021 (+)
G1441315 NA other downstream 177525 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 491373 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 1370230 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1875296 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1948204 35746872 ~ 35751790 (+)

Expression


Co-expression Network