G1441225


Basic Information

Item Value
gene id G1441225
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 33798975 ~ 33800396 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1649847
tgaatacttctgttttttattgataatacattttcaaacctGTTTACACTTTGTAATTtccgggtattgtgtgtagattggtgagaacacaaaaatgtaatacattttagaataagtctgtaacgtaacaaaacgttgaaaaagtcaaggggtctgaattttttctgaatgcactgtatctctaGCTAGGATTCCAAGTGTGTCAACATGCACAAATCACATAATAGGGTAGACTGGGCGTCTGGCAATACCACACTGGTTGTATCCTCTGGCCATGAGAATGTACCCGTCTCTTCCCCAACCAGTACCCCAGCTGTTTTTCACAATCCAGTAGTCCAGGTAAGAACTACCATACCCGACAGCCAGTACAGCATGGTTTGTTCTTGTTGAACAGTCTGGCTCGTAGAGGACTCCATCTTTGTAGAACTTGAAGGAGGGATGTGTGGCGTTCACAGACA

Function

NR:

description
Cathepsin L precursor

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1649847 True 458 lncRNA 0.41 3 33798975 33800396

Neighbor

gene id symbol gene type direction distance location
LOC118940097 NA coding upstream 30316 33767235 ~ 33768659 (+)
LOC118940096 NA coding upstream 202673 33593813 ~ 33596307 (+)
LOC118940095 NA coding upstream 214295 33583355 ~ 33584984 (+)
LOC110493762 LOC106564986 coding upstream 553010 33243976 ~ 33245965 (+)
LOC110493760 LOC106564819 coding upstream 722306 33069756 ~ 33076669 (+)
LOC110493170 LOC108247247 coding downstream 23254 33823650 ~ 33825084 (+)
LOC110493766 LOC106564809 coding downstream 41942 33842338 ~ 33926454 (+)
LOC110493767 LOC106564808 coding downstream 137138 33937534 ~ 33970100 (+)
LOC110493768 hebp1 coding downstream 183264 33983660 ~ 33995716 (+)
LOC110493769 LOC106564807 coding downstream 195772 33996168 ~ 34034123 (+)
G1441224 NA non-coding upstream 307 33798433 ~ 33798668 (+)
G1441218 NA non-coding upstream 8084 33790663 ~ 33790891 (+)
G1441216 NA non-coding upstream 9395 33789341 ~ 33789580 (+)
G1441204 NA non-coding upstream 25481 33773279 ~ 33773494 (+)
G1441203 NA non-coding upstream 26689 33771762 ~ 33772286 (+)
G1441188 NA non-coding downstream 82116 33882512 ~ 33931224 (+)
G1441281 NA non-coding downstream 82469 33882865 ~ 33883147 (+)
G1441286 NA non-coding downstream 90347 33890743 ~ 33891492 (+)
G1441536 NA non-coding downstream 237544 34037940 ~ 34038151 (+)
G1441541 NA non-coding downstream 322772 34123168 ~ 34123495 (+)
G1440890 LOC106564813 other upstream 274441 33524199 ~ 33524534 (+)
G1440162 NA other upstream 842918 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1001543 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 1032268 32712860 ~ 32766707 (+)
rbm34 LOC106564828 other upstream 1188634 32562173 ~ 32662021 (+)
G1441315 NA other downstream 175797 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 489645 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 1368502 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1873568 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1946476 35746872 ~ 35751790 (+)

Expression


Co-expression Network