G1441188


Basic Information

Item Value
gene id G1441188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 33882512 ~ 33931224 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1649806
caaaatggcttaaggacaacaaagtcaaggtattggagtggccatcacaaagccctgacatcaaatcctatagaaattttgtgggcagatctgaaaaagcgtgtgcgagcaaggaggcctacaaacttgactcagttgcaccagctctgccaggaggaatgggtcagaattcactcaacttattgtgggaagattgtggaaggctacccaaaacgtttgacccaagttaaacaatttaaagtcaatgctaccaaatactaattgtttgtgtaaacttctgacccactgggactgtGATGAAAGAATAAAAGATTAAGTAAATaattctctcctattattctgacatttcacattcttaaaataaagtggtgatcttaactgacctaagacagggaatttttactaggattaaatgttaggaattgtgaaaaactgagcttaaatgtatttggctaaggtgtatgtaaacttccgacttcaactgtatattatagCACTACTTTTGGGAAGTCAAGCGGCACCAAGTAATACCAAGAAAAACTGGACAGTCAAATAACTCCAACATTGAGCTTTTACAGCTCTTTTAAGTATAGTTCAAGTTTGCTGATGGTTTTgcacaaacattattttaaatgatgtgacagacagtgttctttcttttttaaattaACCACTAAAGAATACAAGGTAGAAGCTCTTGTTTTTATGATGTCGGTAtgtctttttttttgtcataTCAGTTTTAGTTTATTGtaatattttttgttttatttccatCTTACTCTTTATTAAGTTTTTGTATGGCCATTTTATGATTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1649806 True 819 lncRNA 0.35 2 33882512 33931224
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110493170 LOC108247247 coding upstream 57428 33823650 ~ 33825084 (+)
LOC118940097 NA coding upstream 113853 33767235 ~ 33768659 (+)
LOC118940096 NA coding upstream 286210 33593813 ~ 33596307 (+)
LOC118940095 NA coding upstream 297832 33583355 ~ 33584984 (+)
LOC110493762 LOC106564986 coding upstream 636547 33243976 ~ 33245965 (+)
LOC110493767 LOC106564808 coding downstream 6310 33937534 ~ 33970100 (+)
LOC110493768 hebp1 coding downstream 52436 33983660 ~ 33995716 (+)
LOC110493769 LOC106564807 coding downstream 64944 33996168 ~ 34034123 (+)
LOC110493770 LOC106585018 coding downstream 109037 34040261 ~ 34121223 (+)
LOC110493772 LOC106564803 coding downstream 198702 34129926 ~ 34132623 (+)
G1441225 NA non-coding upstream 82116 33798975 ~ 33800396 (+)
G1441224 NA non-coding upstream 83844 33798433 ~ 33798668 (+)
G1441218 NA non-coding upstream 91621 33790663 ~ 33790891 (+)
G1441216 NA non-coding upstream 92932 33789341 ~ 33789580 (+)
G1441204 NA non-coding upstream 109018 33773279 ~ 33773494 (+)
G1441536 NA non-coding downstream 106716 34037940 ~ 34038151 (+)
G1441541 NA non-coding downstream 191944 34123168 ~ 34123495 (+)
G1441593 NA non-coding downstream 192699 34123923 ~ 34124147 (+)
G1441576 NA non-coding downstream 195096 34126320 ~ 34126633 (+)
G1441580 NA non-coding downstream 196497 34127721 ~ 34128226 (+)
G1440890 LOC106564813 other upstream 357978 33524199 ~ 33524534 (+)
G1440162 NA other upstream 926455 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1085080 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 1115805 32712860 ~ 32766707 (+)
rbm34 LOC106564828 other upstream 1272171 32562173 ~ 32662021 (+)
G1441315 NA other downstream 44969 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 358817 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 1237674 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1742740 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1815648 35746872 ~ 35751790 (+)

Expression

G1441188 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 20.
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G1441188 Expression in each Bioproject

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G1441188 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
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Co-expression Network