G1441541


Basic Information

Item Value
gene id G1441541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 34123168 ~ 34123495 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1650200
CTGTTATAATATTGTTGGTTTTTAGAAATACCGATGTCATTCTCGTAAAAGCCCCGTACAGTATTATGATAGCACGCTACCAGTCAAACtactaaaatgtgaagtttgtGTTGAATAGGACAGGAGTCCCTTTTCTTCCCATCTTCCTCAGCTTTACTTCAGTAAAGGCACCAGATCATCGattttctcttccccctctaacCTCTTCTCCATGCGGATGTGCAGCTTGACCTCGTCCACCACTAGCTACGTGAACCCCACCTTGTCCAAGCCAATTGTCTGGGCATTACTGATGTTATACACCTCACTGCAGTCTAAGGAGTAAGAG

Function

NR:

description
creatine kinase M-type-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1650200 True 328 lncRNA 0.44 1 34123168 34123495

Neighbor

gene id symbol gene type direction distance location
LOC110493770 LOC106585018 coding upstream 1945 34040261 ~ 34121223 (+)
LOC110493769 LOC106564807 coding upstream 89045 33996168 ~ 34034123 (+)
LOC110493768 hebp1 coding upstream 127452 33983660 ~ 33995716 (+)
LOC110493767 LOC106564808 coding upstream 153068 33937534 ~ 33970100 (+)
LOC110493766 LOC106564809 coding upstream 196714 33842338 ~ 33926454 (+)
LOC110493772 LOC106564803 coding downstream 6431 34129926 ~ 34132623 (+)
LOC110493775 LOC106564801 coding downstream 49581 34173076 ~ 34233684 (+)
LOC110493777 NA coding downstream 118418 34241913 ~ 34254653 (+)
LOC110493778 LOC106564798 coding downstream 166522 34290017 ~ 34317682 (+)
LOC110493783 LOC106564979 coding downstream 307392 34430887 ~ 34443032 (+)
G1441536 NA non-coding upstream 85017 34037940 ~ 34038151 (+)
G1441188 NA non-coding upstream 191944 33882512 ~ 33931224 (+)
G1441286 NA non-coding upstream 231676 33890743 ~ 33891492 (+)
G1441281 NA non-coding upstream 240021 33882865 ~ 33883147 (+)
G1441225 NA non-coding upstream 322772 33798975 ~ 33800396 (+)
G1441593 NA non-coding downstream 428 34123923 ~ 34124147 (+)
G1441576 NA non-coding downstream 2825 34126320 ~ 34126633 (+)
G1441580 NA non-coding downstream 4226 34127721 ~ 34128226 (+)
G1441581 NA non-coding downstream 13009 34136504 ~ 34136795 (+)
G1441595 NA non-coding downstream 14631 34138126 ~ 34138580 (+)
G1441315 NA other upstream 146693 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 598634 33524199 ~ 33524534 (+)
G1440162 NA other upstream 1167111 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1325736 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 1356461 32712860 ~ 32766707 (+)
LOC110493802 LOC106564779 other downstream 1045403 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1550469 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1623377 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 2115449 36234292 ~ 36242642 (+)

Expression


Co-expression Network